RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 CREG1O75629 220 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 IGSF6O95976 241 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 PRPS2P11908 318 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 BCKDHAP12694 445 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 IL7RP16871 459 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 IL1RNP18510 177 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 UGT1A1P22309 533 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 UGT1A4P22310 534 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 SERPINA4P29622 427 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 UGT1A3P35503 534 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 UGT1A5P35504 534 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 CSKP41240 450 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 NSG1P42857 185 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 ARHGDIAP52565 204 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 RPS14P62263 151 aaKnown RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 PPP2R2BQ00005 443 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 AAK1Q2M2I8 961 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 C6orf141Q5SZD1 244 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 ANKRD26P1Q6NSI1 321 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 Q6ZNX1 250 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 LRRC70Q7Z2Q7 622 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 GPR149Q86SP6 731 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 TMEM173Q86WV6 379 aaPredicted RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 RGL4Q8IZJ4 473 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 NXPE1Q8N323 547 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 TCAIMQ8N3R3 496 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 FAM86B1Q8N7N1 296 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 ARL10Q8N8L6 244 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 SETD9Q8NE22 299 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 CHDHQ8NE62 594 aaPredicted RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 BPIFB6Q8NFQ5 453 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 OR6K2Q8NGY2 324 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 CLHC1Q8NHS4 586 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 LKAAEAR1Q8TD35 194 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 GIPC3Q8TF64 312 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 SKA2Q8WVK7 121 aaPredicted RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 SNX19Q92543 992 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 EID2BQ96D98 161 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 ASIC4Q96FT7 647 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 MBOAT4Q96T53 435 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 NAA50Q9GZZ1 169 aaKnown RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 LHPPQ9H008 270 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 RNF38Q9H0F5 515 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 KCNH6Q9H252 994 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 RAD21L1Q9H4I0 556 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 KAT8Q9H7Z6 458 aaKnown RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 GPN2Q9H9Y4 310 aaPredicted RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 SMURF2Q9HAU4 748 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 TLR9Q9NR96 1032 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 FARSBQ9NSD9 589 aaKnown RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 FAIMQ9NVQ4 179 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 DNAAF2Q9NVR5 837 aaKnown RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 CHCHD3Q9NX63 227 aaKnown RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 ARL15Q9NXU5 204 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 EVLQ9UI08 416 aaPredicted RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 BAG5Q9UL15 447 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 SAMD4AQ9UPU9 718 aaKnown RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 MAGED1Q9Y5V3 778 aaPredicted RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 MICAL3Q7RTP6 2002 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 ANAPC1Q9H1A4 1944 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 LOC100130705A0A1B0GUX0 176 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 EVPLLA8MZ36 301 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 ARVCFO00192 962 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 EIF3FO00303 357 aaPredicted RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 GAPDHSO14556 408 aaPredicted RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 BCKDKO14874 412 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 NBNO60934 754 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 CLPXO76031 633 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 CLDN7O95471 211 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 PRAMEF12O95522 483 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 SERPINA1P01009 418 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 HIST1H2AGP0C0S8 130 aaPredicted RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 ZNF182P17025 639 aaPredicted RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 BPIP17213 487 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 HIST1H2ADP20671 130 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 MATN1P21941 496 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 HNF1BP35680 557 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 POLR2IP36954 125 aaKnown RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 CSNK1DP48730 415 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 VEGFBP49765 207 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 IST1P53990 364 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 CLDN8P56748 225 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 PHEXP78562 749 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 OCA2Q04671 838 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 BNIP3Q12983 259 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 KCNAB2Q13303 367 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 LAPTM5Q13571 262 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 PON2Q15165 354 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 CHRNA6Q15825 494 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 CPSF6Q16630 551 aaKnown RBP eCLIP6.83□□□□□ -1.32
TDP1-213ENST00000555880 PGS1Q32NB8 556 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 PLA2G4EQ3MJ16 856 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 USP39Q53GS9 565 aaKnown RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 ZC3H12BQ5HYM0 836 aaKnown RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 TPGS2Q68CL5 300 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 XAF1Q6GPH4 301 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 ELMSAN1Q6PJG2 1045 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 XKR5Q6UX68 686 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 TPGS1Q6ZTW0 290 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 MSRB3Q8IXL7 192 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms