RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 PCDHGB2Q9Y5G2 931 aa10.14□□□□□ -0.79
EFCAB11-208ENST00000555872 PCDHGA6Q9Y5G7 932 aa10.14□□□□□ -0.79
EFCAB11-208ENST00000555872 PCDHGA5Q9Y5G8 931 aa10.14□□□□□ -0.79
EFCAB11-208ENST00000555872 PCDHGA1Q9Y5H4 931 aa10.14□□□□□ -0.79
EFCAB11-208ENST00000555872 MYO18AQ92614 2054 aaKnown RBP10.14□□□□□ -0.79
EFCAB11-208ENST00000555872 PARP14Q460N5 1801 aa10.14□□□□□ -0.79
EFCAB11-208ENST00000555872 BCLAF3A2AJT9 711 aaKnown RBP10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 UBDO15205 165 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 POP7O75817 140 aaKnown RBP10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 DGAT1O75907 488 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 TRIM16O95361 564 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 PFKMP08237 780 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 GJA1P17302 382 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 NDUFB7P17568 137 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 TPSB2P20231 275 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 FMO4P31512 558 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 CCR1P32246 355 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 RFC2P35250 354 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 NDST1P52848 882 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 NCS1P62166 190 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 PSPHP78330 225 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 ZNF45Q02386 682 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 BNIP2Q12982 314 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 PTPRRQ15256 657 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 TPSAB1Q15661 275 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 MEP1AQ16819 746 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 COLEC12Q5KU26 742 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 KANK2Q63ZY3 851 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 DENND1BQ6P3S1 775 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 THAP5Q7Z6K1 395 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 PELI3Q8N2H9 469 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 KDM1BQ8NB78 822 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 ACVR1CQ8NER5 493 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 HTR3CQ8WXA8 447 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 UFD1Q92890 307 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 EXOSC8Q96B26 276 aaKnown RBP10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 ATG4CQ96DT6 458 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 ZHX1-C8orf76Q96EF9 292 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 KCTD14Q9BQ13 255 aaPredicted RBP10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 FTHL17Q9BXU8 183 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 CEP41Q9BYV8 373 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 GTSE1Q9NYZ3 720 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 MAGED2Q9UNF1 606 aaPredicted RBP10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 WBP11Q9Y2W2 641 aaKnown RBP10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 PTPRFP10586 1907 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 KIAA1217Q5T5P2 1943 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 MEX3AA1L020 520 aaKnown RBP10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 VSTM5A8MXK1 200 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 H0YAE9 185 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 H7C0S8 307 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 PLD2O14939 933 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 PER2O15055 1255 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 VEGFDO43915 354 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 PRKRAO75569 313 aaKnown RBP10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 GABARAPO95166 117 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 GOSR1O95249 250 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 NDST3O95803 873 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 NDUFB10O96000 172 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 MT-CO1P00395 513 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 CLUP10909 449 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 JUPP14923 745 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 PTBP1P26599 531 aaKnown RBP eCLIP10.13□□□□□ -0.793e-10■■■■□ 21.1
EFCAB11-208ENST00000555872 SPRP35270 261 aaPredicted RBP10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 ACTR1BP42025 376 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 HTR3AP46098 478 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 PPP3CCP48454 512 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 GATMP50440 423 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 SLC26A5P58743 744 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 RPL6Q02878 288 aaKnown RBP10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 TMEM31Q5JXX7 168 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 DGKKQ5KSL6 1271 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 RBM48Q5RL73 367 aaKnown RBP10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 FAM45BPQ6NSW5 357 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 SNX20Q7Z614 316 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 PLEKHH3Q7Z736 793 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 IFNEQ86WN2 208 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 OR5B17Q8NGF7 314 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 FAM45AQ8TCE6 357 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 DYNC2LI1Q8TCX1 351 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 ARNTL2Q8WYA1 636 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 PROX1Q92786 737 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 EXT2Q93063 718 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 AGAP2Q99490 1192 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 NEU1Q99519 415 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 CPNE1Q99829 537 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 SLC25A23Q9BV35 468 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 CCDC86Q9H6F5 360 aaKnown RBP10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 RNF181Q9P0P0 153 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 ZFR2Q9UPR6 939 aaKnown RBP10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 PDE10AQ9Y233 779 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 HACD1B0YJ81 288 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 WRBO00258 174 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 HS6ST1O60243 411 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 CRTAPO75718 401 aaPredicted RBP10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 CBR3O75828 277 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 LDLRP01130 860 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 PGAM1P18669 254 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 NFKB1P19838 968 aa10.13□□□□□ -0.79
EFCAB11-208ENST00000555872 CCR9P51686 369 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms