RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 LY6G6EA0A0G2JKS1 128 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 LMO7DNF2Z398 122 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 STX16-NPEPL1H3BU86 382 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 IFRD1O00458 451 aaPredicted RBP10.45□□□□□ -0.74
TDP1-211ENST00000555178 CDX4O14627 284 aaPredicted RBP10.45□□□□□ -0.74
TDP1-211ENST00000555178 STX16O14662 325 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 PPM1DO15297 605 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 SLC16A5O15375 505 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 GDF9O60383 454 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 CCNT2O60583 730 aaKnown RBP10.45□□□□□ -0.74
TDP1-211ENST00000555178 S100BP04271 92 aaPredicted RBP10.45□□□□□ -0.74
TDP1-211ENST00000555178 ANXA5P08758 320 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 ENO2P09104 434 aaPredicted RBP10.45□□□□□ -0.74
TDP1-211ENST00000555178 HIST1H2AGP0C0S8 130 aaPredicted RBP10.45□□□□□ -0.74
TDP1-211ENST00000555178 MTHFD1P11586 935 aaKnown RBP10.45□□□□□ -0.74
TDP1-211ENST00000555178 HIST1H2ADP20671 130 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 GRK2P25098 689 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 BLKP51451 505 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 PLOD1Q02809 727 aaPredicted RBP10.45□□□□□ -0.74
TDP1-211ENST00000555178 PTCHD3Q3KNS1 767 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 LAIR1Q6GTX8 287 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 TRIM42Q8IWZ5 723 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 FAM20CQ8IXL6 584 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 MINDY1Q8N5J2 469 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 KYQ8NBH2 561 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 OR52B6Q8NGF0 335 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 OR5K2Q8NHB8 316 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 RFWD2Q8NHY2 731 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 RAB3IL1Q8TBN0 382 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 MCOLN3Q8TDD5 553 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 CCDC126Q96EE4 140 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 LOXL4Q96JB6 756 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 HIST1H2AHQ96KK5 128 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 KCNA7Q96RP8 456 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 HIST1H2AJQ99878 128 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 H2AFJQ9BTM1 129 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 NPHS2Q9NP85 383 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 SPASTQ9UBP0 616 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 ZDHHC2Q9UIJ5 367 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 SH2B3Q9UQQ2 575 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 FIS1Q9Y3D6 152 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 U3KQA8 63 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 GVINP1Q7Z2Y8 2422 aa10.44□□□□□ -0.74
TDP1-211ENST00000555178 WDFY3Q8IZQ1 3526 aa10.44□□□□□ -0.74
TDP1-211ENST00000555178 JUNP05412 331 aaKnown RBP10.44□□□□□ -0.74
TDP1-211ENST00000555178 EPORP19235 508 aa10.44□□□□□ -0.74
TDP1-211ENST00000555178 FOXA1P55317 472 aa10.44□□□□□ -0.74
TDP1-211ENST00000555178 UBE2IP63279 158 aaKnown RBP10.44□□□□□ -0.74
TDP1-211ENST00000555178 SH3BP2P78314 561 aa10.44□□□□□ -0.74
TDP1-211ENST00000555178 CLCQ05315 142 aa10.44□□□□□ -0.74
TDP1-211ENST00000555178 TERF2Q15554 542 aa10.44□□□□□ -0.74
TDP1-211ENST00000555178 SULT1C3Q6IMI6 304 aa10.44□□□□□ -0.74
TDP1-211ENST00000555178 UNC5DQ6UXZ4 953 aa10.44□□□□□ -0.74
TDP1-211ENST00000555178 GOLGA7Q7Z5G4 137 aa10.44□□□□□ -0.74
TDP1-211ENST00000555178 RAB44Q7Z6P3 723 aaPredicted RBP10.44□□□□□ -0.74
TDP1-211ENST00000555178 CPLX4Q7Z7G2 160 aa10.44□□□□□ -0.74
TDP1-211ENST00000555178 SLC35F3Q8IY50 421 aa10.44□□□□□ -0.74
TDP1-211ENST00000555178 SFRP1Q8N474 314 aa10.44□□□□□ -0.74
TDP1-211ENST00000555178 TEX9Q8N6V9 391 aa10.44□□□□□ -0.74
TDP1-211ENST00000555178 LINC01555Q8NAE3 123 aa10.44□□□□□ -0.74
TDP1-211ENST00000555178 CEP76Q8TAP6 659 aa10.44□□□□□ -0.74
TDP1-211ENST00000555178 BCAS4Q8TDM0 211 aa10.44□□□□□ -0.74
TDP1-211ENST00000555178 ZNF483Q8TF39 744 aaPredicted RBP10.44□□□□□ -0.74
TDP1-211ENST00000555178 ZNF480Q8WV37 535 aa10.44□□□□□ -0.74
TDP1-211ENST00000555178 SREK1Q8WXA9 508 aaKnown RBP10.44□□□□□ -0.74
TDP1-211ENST00000555178 MED8Q96G25 268 aa10.44□□□□□ -0.74
TDP1-211ENST00000555178 C7orf26Q96N11 449 aa10.44□□□□□ -0.74
TDP1-211ENST00000555178 CAMK1GQ96NX5 476 aa10.44□□□□□ -0.74
TDP1-211ENST00000555178 ELAC2Q9BQ52 826 aaKnown RBP10.44□□□□□ -0.74
TDP1-211ENST00000555178 ZNF225Q9UK10 706 aa10.44□□□□□ -0.74
TDP1-211ENST00000555178 RAB23Q9ULC3 237 aa10.44□□□□□ -0.74
TDP1-211ENST00000555178 TMEM114B3SHH9 223 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 MYO1CO00159 1063 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 NPHS1O60500 1241 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 WDR47O94967 919 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 RETP07949 1114 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 HOXD12P35452 270 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 NBL1P41271 181 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 SLC6A12P48065 614 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 PPP1CAP62136 330 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 CDKL1Q00532 357 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 TSTA3Q13630 321 aaPredicted RBP10.43□□□□□ -0.74
TDP1-211ENST00000555178 COL9A2Q14055 689 aaPredicted RBP10.43□□□□□ -0.74
TDP1-211ENST00000555178 GPR18Q14330 331 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 ELOCQ15369 112 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 ANKS6Q68DC2 871 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 CLEC6AQ6EIG7 209 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 AGTRAPQ6RW13 159 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 SUSD1Q6UWL2 747 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 WASH2PQ6VEQ5 465 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 MAVSQ7Z434 540 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 CUZD1Q86UP6 607 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 DCUN1D3Q8IWE4 304 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 ARL14Q8N4G2 192 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 OR52E1Q8NGJ3 308 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 PPP4R1Q8TF05 950 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 ZNF473Q8WTR7 871 aaKnown RBP10.43□□□□□ -0.74
TDP1-211ENST00000555178 UBTD2Q8WUN7 234 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 SKA1Q96BD8 255 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 PPP1R36Q96LQ0 422 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms