RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 SLC22A4Q9H015 551 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 TSPAN5P62079 268 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 ZNF234Q14588 700 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 PCLAFQ15004 111 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 PAFAH1B3Q15102 231 aaKnown RBP13.67□□□□□ -0.22
VTI1B-204ENST00000554659 POLR2J3Q9H1A7 115 aaKnown RBP13.67□□□□□ -0.22
VTI1B-204ENST00000554659 NUP50Q9UKX7 468 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 TYROBPO43914 113 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 SIX3O95343 332 aaPredicted RBP13.67□□□□□ -0.22
VTI1B-204ENST00000554659 NT5EP21589 574 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 AKT2P31751 481 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 SCARB2Q14108 478 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 TRIM74Q86UV6 250 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 TRIM73Q86UV7 250 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 SAMD14Q8IZD0 417 aaPredicted RBP13.67□□□□□ -0.22
VTI1B-204ENST00000554659 CLIP4Q8N3C7 705 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 ZNF395Q9H8N7 513 aaPredicted RBP13.67□□□□□ -0.22
VTI1B-204ENST00000554659 SLC38A8A6NNN8 435 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 DCLK1O15075 740 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 ACOX3O15254 700 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 OR1F1O43749 312 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 USP2O75604 605 aaPredicted RBP13.67□□□□□ -0.22
VTI1B-204ENST00000554659 AHSGP02765 367 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 ITIH1P19827 911 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 BNIP3Q12983 259 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 TARDBPQ13148 414 aaKnown RBP eCLIP13.67□□□□□ -0.22
VTI1B-204ENST00000554659 RGL4Q8IZJ4 473 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 ZFAND2BQ8WV99 257 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 DUOX1Q9NRD9 1551 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 OR51F1A6NGY5 319 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 CDKL1Q00532 357 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 DEFA5Q01523 94 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 ALKBH2Q6NS38 261 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 RGMBQ6NW40 437 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 OR2L5Q8NG80 312 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 DPF3Q92784 378 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 GAL3ST3Q96A11 431 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 TWNKQ96RR1 684 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 LPIN3Q9BQK8 851 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 ITPAQ9BY32 194 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 POFUT2Q9Y2G5 429 aa13.67□□□□□ -0.22
VTI1B-204ENST00000554659 TBC1D3DA0A087WVF3 549 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 TBC1D3IA0A087WXS9 549 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 TBC1D3EA0A087X179 549 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 TBC1D3KA0A087X1G2 549 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 TBC1D3FA6NER0 549 aaPredicted RBP13.66□□□□□ -0.22
VTI1B-204ENST00000554659 TMEM233B4DJY2 109 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 TBC1D3LB9A6J9 549 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 PI15O43692 258 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 DLDP09622 509 aaKnown RBP13.66□□□□□ -0.22
VTI1B-204ENST00000554659 TBC1D3HP0C7X1 549 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 PSKH1P11801 424 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 PHC1P78364 1004 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 TBC1D3GQ6DHY5 549 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 OR2T5Q6IEZ7 315 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 TBC1D3CQ6IPX1 549 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 TBC1D3Q8IZP1 549 aaPredicted RBP13.66□□□□□ -0.22
VTI1B-204ENST00000554659 CADM2Q8N3J6 435 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 OR2T29Q8NH02 315 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 OR4C6Q8NH72 309 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 USP29Q9HBJ7 922 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 COMMD3Q9UBI1 195 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 PCDH7O60245 1069 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 EOMESO95936 686 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 SPATA31D3P0C874 917 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 PIK3CBP42338 1070 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 DNASE1L1P49184 302 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 CRISP3P54108 245 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 CDH15P55291 814 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 TUBA1BP68363 451 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 TXNL4AP83876 142 aaKnown RBP13.66□□□□□ -0.22
VTI1B-204ENST00000554659 MC1RQ01726 317 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 SLC10A7Q0GE19 358 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 NDUFA9Q16795 377 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 SFT2D3Q587I9 215 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 TMEM220Q6QAJ8 160 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 SPATA31D4Q6ZUB0 917 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 TUBA1AQ71U36 451 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 CDKN2AIPNLQ96HQ2 116 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 CAMK1GQ96NX5 476 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 MYOCQ99972 504 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 SLC29A3Q9BZD2 475 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 UPB1Q9UBR1 384 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 ATRNL1Q5VV63 1379 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 A0A1W2PP18 115 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 ZNF33AQ06730 810 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 EIPR1Q53HC9 387 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 COLEC12Q5KU26 742 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 PTF1AQ7RTS3 328 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 LRRC70Q7Z2Q7 622 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 NATD1Q8N6N6 113 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 SLC22A17Q8WUG5 538 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 C17orf50Q8WW18 174 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 CDK15Q96Q40 435 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 GAL3ST1Q99999 423 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 DCSTAMPQ9H295 470 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 ANKHQ9HCJ1 492 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 FLRT1Q9NZU1 646 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 SIRPGQ9P1W8 387 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 CACNA1FO60840 1977 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms