RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 DNAJC1Q96KC8 554 aaKnown RBP10.25□□□□□ -0.77
SHMT2-215ENST00000554656 LRFN5Q96NI6 719 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 SERPINB12Q96P63 405 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 CCDC77Q9BR77 488 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 NAT9Q9BTE0 207 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 PITPNM3Q9BZ71 974 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 KLHL25Q9H0H3 589 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 ING2Q9H160 280 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 COG4Q9H9E3 785 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 SAYSD1Q9NPB0 183 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 PCMTD2Q9NV79 361 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 SOHLH2Q9NX45 425 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 FETUBQ9UGM5 382 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 CRLS1Q9UJA2 301 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 ANKRD12Q6UB98 2062 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 UNC79Q9P2D8 2635 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 A0A087WUV0 522 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-215ENST00000554656 TCRBV7S3A2A0A539 114 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 GSAPA4D1B5 854 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 KLHL33A6NCF5 533 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 TMEM150CB9EJG8 249 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 MEN1O00255 615 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 CEACAM4O75871 244 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 SORBS2O94875 1100 aaKnown RBP10.24□□□□□ -0.77
SHMT2-215ENST00000554656 AP2A1O95782 977 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 APRTP07741 180 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 MYZAPP0CAP1 466 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 RNF224P0DH78 156 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 ATP1B2P14415 290 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-215ENST00000554656 CDH3P22223 829 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 GNLYP22749 145 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 NDUFS1P28331 727 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 PHBP35232 272 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 PREPP48147 710 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 PGDP52209 483 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 ITGA1P56199 1179 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 RPS15P62841 145 aaKnown RBP10.24□□□□□ -0.77
SHMT2-215ENST00000554656 IFFO1Q0D2I5 559 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 PDIA2Q13087 525 aaKnown RBP10.24□□□□□ -0.77
SHMT2-215ENST00000554656 SLC29A2Q14542 456 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 KYNUQ16719 465 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 PTCHD3Q3KNS1 767 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 PRR30Q53SZ7 412 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-215ENST00000554656 ZNF385CQ66K41 422 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-215ENST00000554656 KCTD11Q693B1 232 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 ARMC6Q6NXE6 501 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 LRRC8BQ6P9F7 803 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 LINC00523Q86TU6 105 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 PIANPQ8IYJ0 282 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 ADGRF3Q8IZF5 1079 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 RIBC1Q8N443 379 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-215ENST00000554656 PHC3Q8NDX5 983 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 PYROXD1Q8WU10 500 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 LCN9Q8WX39 176 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 COPS8Q99627 209 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 TBL1YQ9BQ87 522 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 CCM2Q9BSQ5 444 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 HGH1Q9BTY7 390 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 SLC25A23Q9BV35 468 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 XKR8Q9H6D3 395 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 LRRC40Q9H9A6 602 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 ARNT2Q9HBZ2 717 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 C1GALT1Q9NS00 363 aa10.24□□□□□ -0.77
SHMT2-215ENST00000554656 AAR2Q9Y312 384 aaKnown RBP10.24□□□□□ -0.77
SHMT2-215ENST00000554656 PCDHGA9Q9Y5G4 932 aaKnown RBP10.24□□□□□ -0.77
SHMT2-215ENST00000554656 C17orf113A0A1B0GUU1 675 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 HMGB1P1B2RPK0 211 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-215ENST00000554656 H3BMH7 237 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 HCRTR1O43613 425 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 CRTAMO95727 393 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 SYF2O95926 243 aaKnown RBP10.23□□□□□ -0.77
SHMT2-215ENST00000554656 RAB40ALP0C0E4 278 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 MSL3P1P0C860 447 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 ITGALP20701 1170 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 ACRV1P26436 265 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 PRDX3P30048 256 aaKnown RBP10.23□□□□□ -0.77
SHMT2-215ENST00000554656 MC4RP32245 332 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 CCL11P51671 97 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 PDE1BQ01064 536 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 ZNF844Q08AG5 666 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 BOP1Q14137 746 aaKnown RBP10.23□□□□□ -0.77
SHMT2-215ENST00000554656 RASA2Q15283 850 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 DBN1Q16643 649 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 BBS9Q3SYG4 887 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 CEP85LQ5SZL2 805 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 TMTC4Q5T4D3 741 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 CYS1Q717R9 158 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 SNX20Q7Z614 316 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 TRIM73Q86UV7 250 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 CAND1Q86VP6 1230 aaKnown RBP10.23□□□□□ -0.77
SHMT2-215ENST00000554656 SERPINA9Q86WD7 417 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 TDRPQ86YL5 185 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 TMEM151BQ8IW70 566 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 SYTL1Q8IYJ3 562 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 ZBED8Q8IZ13 594 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 ZBTB2Q8N680 514 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 CLDN19Q8N6F1 224 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 Q8NA96 180 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 OR52E1Q8NGJ3 308 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 CPT1CQ8TCG5 803 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms