RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 IPPKQ9H8X2 491 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 ZBTB26Q9HCK0 441 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 NPHS2Q9NP85 383 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 MID1IP1Q9NPA3 183 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 SEMA4BQ9NPR2 832 aaPredicted RBP7.43□□□□□ -1.22
TDP1-209ENST00000554180 CCDC177Q9NQR7 707 aaPredicted RBP7.43□□□□□ -1.22
TDP1-209ENST00000554180 POT1Q9NUX5 634 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 KCNK4Q9NYG8 393 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 GPRC5BQ9NZH0 403 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.43□□□□□ -1.22
TDP1-209ENST00000554180 TAAR2Q9P1P5 351 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 KLF15Q9UIH9 416 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 ASB1Q9Y576 335 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 ANGPTL3Q9Y5C1 460 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 CUL9Q8IWT3 2517 aa7.43□□□□□ -1.22
TDP1-209ENST00000554180 LRP4O75096 1905 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 FAM221BA6H8Z2 402 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 LRRC14BA6NHZ5 514 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 TRPC5OSA6NMA1 111 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 OR52A4PA6NMU1 304 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 PRR33A8MZF0 331 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 LMO7DNF2Z398 122 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 UBFD1O14562 309 aaKnown RBP7.42□□□□□ -1.22
TDP1-209ENST00000554180 HGSO14964 777 aaPredicted RBP7.42□□□□□ -1.22
TDP1-209ENST00000554180 AZIN1O14977 448 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 HDAC3O15379 428 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 YKT6O15498 198 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 AQP9O43315 295 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 GALR2O43603 387 aaPredicted RBP7.42□□□□□ -1.22
TDP1-209ENST00000554180 DFNA5O60443 496 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 WDR47O94967 919 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 CHEK2O96017 543 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 EBLN1P0CF75 366 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 UROSP10746 265 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 MPSTP25325 297 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 PKLRP30613 574 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 SHMT2P34897 504 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 GDF5P43026 501 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 CCR10P46092 362 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 RXRGP48443 463 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 ARRB1P49407 418 aaPredicted RBP7.42□□□□□ -1.22
TDP1-209ENST00000554180 CCNG1P51959 295 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 INHBCP55103 352 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 TBPL1P62380 186 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 UBE2IP63279 158 aaKnown RBP7.42□□□□□ -1.22
TDP1-209ENST00000554180 SH3BP2P78314 561 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 SRSF5Q13243 272 aaKnown RBP7.42□□□□□ -1.22
TDP1-209ENST00000554180 NAE1Q13564 534 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 SIM2Q14190 667 aaPredicted RBP7.42□□□□□ -1.22
TDP1-209ENST00000554180 E2F2Q14209 437 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 KRT33BQ14525 404 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 RBBP7Q16576 425 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 ZXDCQ2QGD7 858 aaPredicted RBP7.42□□□□□ -1.22
TDP1-209ENST00000554180 C18orf21Q32NC0 220 aaPredicted RBP7.42□□□□□ -1.22
TDP1-209ENST00000554180 CCSMST1Q4G0I0 132 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 ZNF542PQ5EBM4 170 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 FBXO48Q5FWF7 155 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 C10orf62Q5T681 223 aaPredicted RBP7.42□□□□□ -1.22
TDP1-209ENST00000554180 KANK2Q63ZY3 851 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 IYDQ6PHW0 289 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 ATG14Q6ZNE5 492 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 RNF165Q6ZSG1 346 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 THOC6Q86W42 341 aaKnown RBP7.42□□□□□ -1.22
TDP1-209ENST00000554180 CACNA2D3Q8IZS8 1091 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 SFRP1Q8N474 314 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 TEX9Q8N6V9 391 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 CCDC197Q8NCU1 140 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 ZNF548Q8NEK5 533 aaPredicted RBP7.42□□□□□ -1.22
TDP1-209ENST00000554180 OR52E1Q8NGJ3 308 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 OR2L8Q8NGY9 312 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 SETD7Q8WTS6 366 aaKnown RBP7.42□□□□□ -1.22
TDP1-209ENST00000554180 C10orf82Q8WW14 230 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 SMPDL3AQ92484 453 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 ATP6V1E2Q96A05 226 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 ESAMQ96AP7 390 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 CXorf40BQ96DE9 158 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 LOXL4Q96JB6 756 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 CAMK1GQ96NX5 476 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 FERD3LQ96RJ6 166 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 ELF4Q99607 663 aaPredicted RBP7.42□□□□□ -1.22
TDP1-209ENST00000554180 HAUS8Q9BT25 410 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 SLC29A3Q9BZD2 475 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 ATG10Q9H0Y0 220 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 TCEAL2Q9H3H9 227 aaPredicted RBP7.42□□□□□ -1.22
TDP1-209ENST00000554180 EHD1Q9H4M9 534 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 NOL11Q9H8H0 719 aaKnown RBP7.42□□□□□ -1.22
TDP1-209ENST00000554180 ZNF395Q9H8N7 513 aaPredicted RBP7.42□□□□□ -1.22
TDP1-209ENST00000554180 PFDN4Q9NQP4 134 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 OR6C2Q9NZP2 312 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 SCHIP1Q9P0W5 487 aaPredicted RBP7.42□□□□□ -1.22
TDP1-209ENST00000554180 MARCOQ9UEW3 520 aaPredicted RBP7.42□□□□□ -1.22
TDP1-209ENST00000554180 TRPS1Q9UHF7 1281 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 ZDHHC2Q9UIJ5 367 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 TDRKHQ9Y2W6 561 aaKnown RBP7.42□□□□□ -1.22
TDP1-209ENST00000554180 ARL2BPQ9Y2Y0 163 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 TRAF6Q9Y4K3 522 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 CFAP20Q9Y6A4 193 aaKnown RBP7.42□□□□□ -1.22
TDP1-209ENST00000554180 KCNE2Q9Y6J6 123 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 CSNK1G3Q9Y6M4 447 aa7.42□□□□□ -1.22
TDP1-209ENST00000554180 USH1CQ9Y6N9 552 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms