RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 LRRC40Q9H9A6 602 aa11.13□□□□□ -0.63
TUBB3-204ENST00000554116 FEZ2Q9UHY8 353 aaPredicted RBP11.13□□□□□ -0.63
TUBB3-204ENST00000554116 NOVA2Q9UNW9 492 aaKnown RBP11.13□□□□□ -0.63
TUBB3-204ENST00000554116 ZNF148Q9UQR1 794 aa11.13□□□□□ -0.63
TUBB3-204ENST00000554116 PRSS21Q9Y6M0 314 aa11.13□□□□□ -0.63
TUBB3-204ENST00000554116 CCDC78A2IDD5 438 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 C2orf74A8MZ97 194 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 C9J4A7 227 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 SOCS6O14544 535 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 LRRTM2O43300 516 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 OR2B3O76000 313 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 AP2A1O95782 977 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 ONECUT2O95948 504 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 IFNB1P01574 187 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 HBQ1P09105 142 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 ATXN8OSP0DMR3 200 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 TPH1P17752 444 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 AGXTP21549 392 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 GLRBP48167 497 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 PER3P56645 1201 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 DCDP81605 110 aaKnown RBP11.12□□□□□ -0.63
TUBB3-204ENST00000554116 Q0VFX4 171 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 SNX1Q13596 522 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 KRT33BQ14525 404 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 OASLQ15646 514 aaKnown RBP11.12□□□□□ -0.63
TUBB3-204ENST00000554116 ZRSR2Q15696 482 aaKnown RBP11.12□□□□□ -0.63
TUBB3-204ENST00000554116 NKAIN1Q4KMZ8 207 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 LYPLAL1Q5VWZ2 237 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 COX15Q7KZN9 410 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 SNX20Q7Z614 316 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 DTWD1Q8N5C7 304 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 ZNF655Q8N720 491 aaPredicted RBP11.12□□□□□ -0.63
TUBB3-204ENST00000554116 TRIM58Q8NG06 486 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 PTERQ96BW5 349 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 FER1L6-AS2Q96M78 137 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 IP6K3Q96PC2 410 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 COPS8Q99627 209 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 MENTQ9BUN1 341 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 UNKQ9C0B0 810 aaKnown RBP11.12□□□□□ -0.63
TUBB3-204ENST00000554116 ILKAPQ9H0C8 392 aaPredicted RBP11.12□□□□□ -0.63
TUBB3-204ENST00000554116 RUBCNLQ9H714 662 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 GRPEL1Q9HAV7 217 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 SLC6A20Q9NP91 592 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 ZDHHC3Q9NYG2 299 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 CRLS1Q9UJA2 301 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 PADI2Q9Y2J8 665 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 PPP2R2CQ9Y2T4 447 aa11.12□□□□□ -0.63
TUBB3-204ENST00000554116 ZNF469Q96JG9 3925 aaPredicted RBP11.11□□□□□ -0.63
TUBB3-204ENST00000554116 ARHGAP10A1A4S6 786 aa11.11□□□□□ -0.63
TUBB3-204ENST00000554116 BHMG1C9JSJ3 638 aaPredicted RBP11.11□□□□□ -0.63
TUBB3-204ENST00000554116 AGPSO00116 658 aa11.11□□□□□ -0.63
TUBB3-204ENST00000554116 ZG16O60844 167 aa11.11□□□□□ -0.63
TUBB3-204ENST00000554116 CHRM5P08912 532 aaPredicted RBP11.11□□□□□ -0.63
TUBB3-204ENST00000554116 FOLR3P41439 243 aa11.11□□□□□ -0.63
TUBB3-204ENST00000554116 RPA4Q13156 261 aa11.11□□□□□ -0.63
TUBB3-204ENST00000554116 KIRREL2Q6UWL6 708 aa11.11□□□□□ -0.63
TUBB3-204ENST00000554116 NAPRTQ6XQN6 538 aa11.11□□□□□ -0.63
TUBB3-204ENST00000554116 SERPINA9Q86WD7 417 aa11.11□□□□□ -0.63
TUBB3-204ENST00000554116 AMER2Q8N7J2 671 aa11.11□□□□□ -0.63
TUBB3-204ENST00000554116 CLEC1AQ8NC01 280 aa11.11□□□□□ -0.63
TUBB3-204ENST00000554116 PROKR1Q8TCW9 393 aa11.11□□□□□ -0.63
TUBB3-204ENST00000554116 GRHL3Q8TE85 626 aa11.11□□□□□ -0.63
TUBB3-204ENST00000554116 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.11□□□□□ -0.63
TUBB3-204ENST00000554116 DNAJC1Q96KC8 554 aaKnown RBP11.11□□□□□ -0.63
TUBB3-204ENST00000554116 SPSB2Q99619 263 aa11.11□□□□□ -0.63
TUBB3-204ENST00000554116 C19orf43Q9BQ61 176 aa11.11□□□□□ -0.63
TUBB3-204ENST00000554116 WDR77Q9BQA1 342 aaPredicted RBP11.11□□□□□ -0.63
TUBB3-204ENST00000554116 ETNK1Q9HBU6 452 aa11.11□□□□□ -0.63
TUBB3-204ENST00000554116 PIH1D1Q9NWS0 290 aaKnown RBP11.11□□□□□ -0.63
TUBB3-204ENST00000554116 IFT80Q9P2H3 777 aaPredicted RBP11.11□□□□□ -0.63
TUBB3-204ENST00000554116 OSGIN2Q9Y236 505 aa11.11□□□□□ -0.63
TUBB3-204ENST00000554116 KLHL20Q9Y2M5 609 aa11.11□□□□□ -0.63
TUBB3-204ENST00000554116 HS3ST3B1Q9Y662 390 aa11.11□□□□□ -0.63
TUBB3-204ENST00000554116 AP1M2Q9Y6Q5 423 aa11.11□□□□□ -0.63
TUBB3-204ENST00000554116 HEATR9A2RTY3 570 aa11.1□□□□□ -0.63
TUBB3-204ENST00000554116 H7C0S8 307 aa11.1□□□□□ -0.63
TUBB3-204ENST00000554116 ZSCAN9O15535 394 aaPredicted RBP11.1□□□□□ -0.63
TUBB3-204ENST00000554116 MED26O95402 600 aa11.1□□□□□ -0.63
TUBB3-204ENST00000554116 ETS1P14921 441 aa11.1□□□□□ -0.63
TUBB3-204ENST00000554116 PSMA3P25788 255 aa11.1□□□□□ -0.63
TUBB3-204ENST00000554116 ACRV1P26436 265 aa11.1□□□□□ -0.63
TUBB3-204ENST00000554116 MC4RP32245 332 aa11.1□□□□□ -0.63
TUBB3-204ENST00000554116 FDFT1P37268 417 aa11.1□□□□□ -0.63
TUBB3-204ENST00000554116 GRB7Q14451 532 aa11.1□□□□□ -0.63
TUBB3-204ENST00000554116 POU6F1Q14863 301 aa11.1□□□□□ -0.63
TUBB3-204ENST00000554116 CCNG2Q16589 344 aa11.1□□□□□ -0.63
TUBB3-204ENST00000554116 DBN1Q16643 649 aa11.1□□□□□ -0.63
TUBB3-204ENST00000554116 ZNF324BQ6AW86 544 aaPredicted RBP11.1□□□□□ -0.63
TUBB3-204ENST00000554116 SP5Q6BEB4 398 aaPredicted RBP11.1□□□□□ -0.63
TUBB3-204ENST00000554116 PRUNE1Q86TP1 453 aa11.1□□□□□ -0.63
TUBB3-204ENST00000554116 LINC00523Q86TU6 105 aa11.1□□□□□ -0.63
TUBB3-204ENST00000554116 GPR135Q8IZ08 494 aa11.1□□□□□ -0.63
TUBB3-204ENST00000554116 ZADH2Q8N4Q0 377 aa11.1□□□□□ -0.63
TUBB3-204ENST00000554116 CCDC89Q8N998 374 aa11.1□□□□□ -0.63
TUBB3-204ENST00000554116 DNAAF3Q8N9W5 541 aa11.1□□□□□ -0.63
TUBB3-204ENST00000554116 LINC01555Q8NAE3 123 aa11.1□□□□□ -0.63
TUBB3-204ENST00000554116 PPP4R1Q8TF05 950 aa11.1□□□□□ -0.63
TUBB3-204ENST00000554116 FAR1Q8WVX9 515 aa11.1□□□□□ -0.63
TUBB3-204ENST00000554116 MAIP1Q8WWC4 291 aa11.1□□□□□ -0.63
TUBB3-204ENST00000554116 ULK4Q96C45 1275 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms