RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 HSPA14Q0VDF9 509 aa9.54□□□□□ -0.88
ACTN1-210ENST00000553779 AIMP2Q13155 320 aaKnown RBP9.54□□□□□ -0.88
ACTN1-210ENST00000553779 RBBP7Q16576 425 aa9.54□□□□□ -0.88
ACTN1-210ENST00000553779 SLC5A12Q1EHB4 618 aa9.54□□□□□ -0.88
ACTN1-210ENST00000553779 PLEKHN1Q494U1 663 aaPredicted RBP9.54□□□□□ -0.88
ACTN1-210ENST00000553779 PACS1Q6VY07 963 aa9.54□□□□□ -0.88
ACTN1-210ENST00000553779 PEX26Q7Z412 305 aa9.54□□□□□ -0.88
ACTN1-210ENST00000553779 PIANPQ8IYJ0 282 aa9.54□□□□□ -0.88
ACTN1-210ENST00000553779 TXLNBQ8N3L3 684 aa9.54□□□□□ -0.88
ACTN1-210ENST00000553779 C2orf73Q8N5S3 287 aaPredicted RBP9.54□□□□□ -0.88
ACTN1-210ENST00000553779 OR6P1Q8NGX9 317 aa9.54□□□□□ -0.88
ACTN1-210ENST00000553779 SLC22A18Q96BI1 424 aa9.54□□□□□ -0.88
ACTN1-210ENST00000553779 CDKN2AIPNLQ96HQ2 116 aa9.54□□□□□ -0.88
ACTN1-210ENST00000553779 FAM60AQ9NP50 221 aa9.54□□□□□ -0.88
ACTN1-210ENST00000553779 SPHK1Q9NYA1 384 aa9.54□□□□□ -0.88
ACTN1-210ENST00000553779 CIDEBQ9UHD4 219 aa9.54□□□□□ -0.88
ACTN1-210ENST00000553779 AMFRQ9UKV5 643 aa9.54□□□□□ -0.88
ACTN1-210ENST00000553779 FAM169AQ9Y6X4 670 aa9.54□□□□□ -0.88
ACTN1-210ENST00000553779 CROCCQ5TZA2 2017 aa9.54□□□□□ -0.88
ACTN1-210ENST00000553779 SCN3AQ9NY46 2000 aa9.54□□□□□ -0.88
ACTN1-210ENST00000553779 CACNA1CQ13936 2221 aa9.54□□□□□ -0.88
ACTN1-210ENST00000553779 CPAMD8Q8IZJ3 1885 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 HEATR9A2RTY3 570 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 SOWAHDA6NJG2 315 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 H7C0S8 307 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 AGPSO00116 658 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 ZNF500O60304 480 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-210ENST00000553779 ALOX12BO75342 701 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 KLF7O75840 302 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-210ENST00000553779 RNF224P0DH78 156 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 ERVK-10P10266 1014 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 MAGP20916 626 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 RAB28P51157 221 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 CDH17Q12864 832 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 CDC16Q13042 620 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 TBX2Q13207 712 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-210ENST00000553779 SF1Q15637 639 aaKnown RBP9.53□□□□□ -0.88
ACTN1-210ENST00000553779 ZIC1Q15915 447 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 TUBB8Q3ZCM7 444 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 FASTKD1Q53R41 847 aaKnown RBP9.53□□□□□ -0.88
ACTN1-210ENST00000553779 DNAJC21Q5F1R6 531 aaKnown RBP9.53□□□□□ -0.88
ACTN1-210ENST00000553779 ZC3H12BQ5HYM0 836 aaKnown RBP9.53□□□□□ -0.88
ACTN1-210ENST00000553779 AARS2Q5JTZ9 985 aaKnown RBP9.53□□□□□ -0.88
ACTN1-210ENST00000553779 SEL1L2Q5TEA6 688 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 AGAP7PQ5VUJ5 663 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 ZNF787Q6DD87 383 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 DENND5AQ6IQ26 1287 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 AADACL2Q6P093 401 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 PPP1R32Q7Z5V6 425 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 DCUN1D3Q8IWE4 304 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 SYCE1Q8N0S2 351 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 METTL27Q8N6F8 245 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-210ENST00000553779 TC2NQ8N9U0 490 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 PPHLN1Q8NEY8 458 aaKnown RBP9.53□□□□□ -0.88
ACTN1-210ENST00000553779 FKBP10Q96AY3 582 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 MAGEB10Q96LZ2 347 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-210ENST00000553779 AGAP4Q96P64 663 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 WDR77Q9BQA1 342 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-210ENST00000553779 SELENOSQ9BQE4 189 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 RAB11FIP5Q9BXF6 653 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 ARNT2Q9HBZ2 717 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 MRM3Q9HC36 420 aaKnown RBP9.53□□□□□ -0.88
ACTN1-210ENST00000553779 EURLQ9NYK6 297 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 ERRFI1Q9UJM3 462 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-210ENST00000553779 KLHL20Q9Y2M5 609 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 PRSS21Q9Y6M0 314 aa9.53□□□□□ -0.88
ACTN1-210ENST00000553779 CCDC162PA2VCL2 907 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 DYNC1I1O14576 645 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 LDLRP01130 860 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 IFNB1P01574 187 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 COL8A1P27658 744 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 PKLRP30613 574 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 FOXL2P58012 376 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 OCA2Q04671 838 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 GRM7Q14831 915 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 HIF1AQ16665 826 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 TCTE1Q5JU00 501 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 PRAMEF13Q5VWM6 474 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 ZNF385CQ66K41 422 aaPredicted RBP9.52□□□□□ -0.89
ACTN1-210ENST00000553779 PTRHD1Q6GMV3 140 aaKnown RBP9.52□□□□□ -0.89
ACTN1-210ENST00000553779 FAM180AQ6UWF9 173 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 SHISA6Q6ZSJ9 500 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 MICALCLQ6ZW33 695 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 MCATQ8IVS2 390 aaKnown RBP9.52□□□□□ -0.89
ACTN1-210ENST00000553779 FAM20CQ8IXL6 584 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 OR52K1Q8NGK4 314 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 DNAJB14Q8TBM8 379 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 COG1Q8WTW3 980 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 ASZ1Q8WWH4 475 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 MRFAP1L1Q96HT8 127 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 FOPNLQ96NB1 174 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 TMEM121Q9BTD3 319 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 YIPF2Q9BWQ6 316 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 CHRNA10Q9GZZ6 450 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 SOX17Q9H6I2 414 aaPredicted RBP9.52□□□□□ -0.89
ACTN1-210ENST00000553779 SLC6A20Q9NP91 592 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 CUTCQ9NTM9 273 aa9.52□□□□□ -0.89
ACTN1-210ENST00000553779 NXT1Q9UKK6 140 aaKnown RBP9.52□□□□□ -0.89
ACTN1-210ENST00000553779 EPN1Q9Y6I3 576 aaPredicted RBP9.52□□□□□ -0.89
ACTN1-210ENST00000553779 GTF3C1Q12789 2109 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms