RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 HIST2H2ACQ16777 129 aaPredicted RBP12.09□□□□□ -0.47
HDAC7-230ENST00000552960 ATAD3BQ5T9A4 648 aa12.09□□□□□ -0.47
HDAC7-230ENST00000552960 ZNF691Q5VV52 312 aa12.09□□□□□ -0.47
HDAC7-230ENST00000552960 FUT10Q6P4F1 479 aa12.09□□□□□ -0.47
HDAC7-230ENST00000552960 B3GNT8Q7Z7M8 397 aa12.09□□□□□ -0.47
HDAC7-230ENST00000552960 AKAP14Q86UN6 197 aa12.09□□□□□ -0.47
HDAC7-230ENST00000552960 MFSD4AQ8N468 514 aa12.09□□□□□ -0.47
HDAC7-230ENST00000552960 IPPKQ9H8X2 491 aa12.09□□□□□ -0.47
HDAC7-230ENST00000552960 ZBTB20Q9HC78 741 aaPredicted RBP12.09□□□□□ -0.47
HDAC7-230ENST00000552960 KIF17Q9P2E2 1029 aa12.09□□□□□ -0.47
HDAC7-230ENST00000552960 FKBPLQ9UIM3 349 aa12.09□□□□□ -0.47
HDAC7-230ENST00000552960 TPRKBQ9Y3C4 175 aa12.09□□□□□ -0.47
HDAC7-230ENST00000552960 E2F3O00716 465 aa12.09□□□□□ -0.47
HDAC7-230ENST00000552960 CREG1O75629 220 aa12.09□□□□□ -0.47
HDAC7-230ENST00000552960 GABARAPO95166 117 aa12.09□□□□□ -0.47
HDAC7-230ENST00000552960 FGF1P05230 155 aa12.09□□□□□ -0.47
HDAC7-230ENST00000552960 ACRP10323 421 aa12.09□□□□□ -0.47
HDAC7-230ENST00000552960 ARTNQ5T4W7 220 aa12.09□□□□□ -0.47
HDAC7-230ENST00000552960 CES5AQ6NT32 575 aa12.09□□□□□ -0.47
HDAC7-230ENST00000552960 LIX1Q8N485 282 aa12.09□□□□□ -0.47
HDAC7-230ENST00000552960 NKAPQ8N5F7 415 aaKnown RBP12.09□□□□□ -0.47
HDAC7-230ENST00000552960 ATG16L2Q8NAA4 619 aa12.09□□□□□ -0.47
HDAC7-230ENST00000552960 LPCAT1Q8NF37 534 aa12.09□□□□□ -0.47
HDAC7-230ENST00000552960 OR5K1Q8NHB7 308 aa12.09□□□□□ -0.47
HDAC7-230ENST00000552960 DSN1Q9H410 356 aa12.09□□□□□ -0.47
HDAC7-230ENST00000552960 MAGEE1Q9HCI5 957 aa12.09□□□□□ -0.47
HDAC7-230ENST00000552960 PCDHGA10Q9Y5H3 936 aa12.09□□□□□ -0.47
HDAC7-230ENST00000552960 A0A0D9SEW6 157 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 LOC285095A0A1B0GVY8 99 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 DYTNA2CJ06 578 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 EFCAB9A8MZ26 197 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 LRATO95237 230 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 HPRP00739 348 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 PKMP14618 531 aaKnown RBP12.08□□□□□ -0.48
HDAC7-230ENST00000552960 MSH3P20585 1137 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 CD40LGP29965 261 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 ALDH7A1P49419 539 aaKnown RBP12.08□□□□□ -0.48
HDAC7-230ENST00000552960 GABARAPL2P60520 117 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 GRIK2Q13002 908 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 LRRC49Q8IUZ0 686 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 UMODL1-AS1Q8N2C9 162 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 SVOPLQ8N434 492 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 ZNF548Q8NEK5 533 aaPredicted RBP12.08□□□□□ -0.48
HDAC7-230ENST00000552960 MYEOVQ96EZ4 313 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 ZBED2Q9BTP6 218 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 ANKMY1Q9P2S6 941 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 CAB39Q9Y376 341 aaPredicted RBP12.08□□□□□ -0.48
HDAC7-230ENST00000552960 PCDHGC4Q9Y5F7 938 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 ASNA1O43681 348 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 RECQL5O94762 991 aaPredicted RBP12.08□□□□□ -0.48
HDAC7-230ENST00000552960 FKBP9O95302 570 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 HLA-DPA1P20036 260 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 HOXC13P31276 330 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 MC4RP32245 332 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 MASP1P48740 699 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 ARHGDIAP52565 204 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 CYP4F2P78329 520 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 DEFB103AP81534 67 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 FKBP9P1Q75LS8 142 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 CYP4Z1Q86W10 505 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 ZDHHC21Q8IVQ6 265 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 C10orf111Q8N326 155 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 DPP10Q8N608 796 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 CDC26Q8NHZ8 85 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 GTF2H4Q92759 462 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 TRIM62Q9BVG3 475 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 DCSTAMPQ9H295 470 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 NSUN3Q9H649 340 aaKnown RBP12.08□□□□□ -0.48
HDAC7-230ENST00000552960 SLC6A13Q9NSD5 602 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.08□□□□□ -0.48
HDAC7-230ENST00000552960 VNN3Q9NY84 501 aa12.08□□□□□ -0.48
HDAC7-230ENST00000552960 EIF3LQ9Y262 564 aaKnown RBP12.08□□□□□ -0.48
HDAC7-230ENST00000552960 LINC00854A0A1B0GVQ3 168 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 RAD51BO15315 384 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 RGS10O43665 173 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 PGRP06401 933 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 RHOQP17081 205 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 COPZ1P61923 177 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 C10orf120Q5SQS8 335 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 LAIR1Q6GTX8 287 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 GOLGA7Q7Z5G4 137 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 SLC22A15Q8IZD6 547 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 FAM83FQ8NEG4 500 aaPredicted RBP12.07□□□□□ -0.48
HDAC7-230ENST00000552960 OR7D4Q8NG98 312 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 VMP1Q96GC9 406 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 ZNF641Q96N77 438 aaPredicted RBP12.07□□□□□ -0.48
HDAC7-230ENST00000552960 REXO4Q9GZR2 422 aaKnown RBP12.07□□□□□ -0.48
HDAC7-230ENST00000552960 ERVK-11Q9UQG0 969 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 PKP3Q9Y446 797 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 MTMR11A4FU01 709 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 PITPNM1O00562 1244 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 HOXB8P17481 243 aaPredicted RBP12.07□□□□□ -0.48
HDAC7-230ENST00000552960 OGNP20774 298 aaKnown RBP12.07□□□□□ -0.48
HDAC7-230ENST00000552960 NEK2P51955 445 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 TRAF3Q13114 568 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 GTF2H2Q13888 395 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 RSBN1Q5VWQ0 802 aaPredicted RBP12.07□□□□□ -0.48
HDAC7-230ENST00000552960 GTF2H2CQ6P1K8 395 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 CEP68Q76N32 757 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 GALNT7Q86SF2 657 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms