RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 PTGS2P35354 604 aa12.78□□□□□ -0.36
SNRPF-203ENST00000551316 CDH6P55285 790 aa12.78□□□□□ -0.36
SNRPF-203ENST00000551316 RPL26P61254 145 aaKnown RBP12.78□□□□□ -0.36
SNRPF-203ENST00000551316 SRSF2Q01130 221 aaKnown RBP12.78□□□□□ -0.36
SNRPF-203ENST00000551316 FASTKQ14296 549 aaKnown RBP12.78□□□□□ -0.36
SNRPF-203ENST00000551316 OR1C1Q15619 314 aa12.78□□□□□ -0.36
SNRPF-203ENST00000551316 SHISA5Q8N114 240 aa12.78□□□□□ -0.36
SNRPF-203ENST00000551316 LMNTD1Q8N9Z9 388 aa12.78□□□□□ -0.36
SNRPF-203ENST00000551316 PHC3Q8NDX5 983 aa12.78□□□□□ -0.36
SNRPF-203ENST00000551316 TRIB3Q96RU7 358 aa12.78□□□□□ -0.36
SNRPF-203ENST00000551316 MENTQ9BUN1 341 aa12.78□□□□□ -0.36
SNRPF-203ENST00000551316 CUTCQ9NTM9 273 aa12.78□□□□□ -0.36
SNRPF-203ENST00000551316 FANCLQ9NW38 375 aa12.78□□□□□ -0.36
SNRPF-203ENST00000551316 BEX4Q9NWD9 120 aaPredicted RBP12.78□□□□□ -0.36
SNRPF-203ENST00000551316 EURLQ9NYK6 297 aa12.78□□□□□ -0.36
SNRPF-203ENST00000551316 ADAM22Q9P0K1 906 aa12.78□□□□□ -0.36
SNRPF-203ENST00000551316 STOX2Q9P2F5 926 aaPredicted RBP12.78□□□□□ -0.36
SNRPF-203ENST00000551316 RPL26L1Q9UNX3 145 aaKnown RBP12.78□□□□□ -0.36
SNRPF-203ENST00000551316 PRKDCP78527 4128 aaKnown RBP12.78□□□□□ -0.36
SNRPF-203ENST00000551316 KIAA1549Q9HCM3 1950 aa12.78□□□□□ -0.36
SNRPF-203ENST00000551316 MGAM2Q2M2H8 2515 aa12.78□□□□□ -0.36
SNRPF-203ENST00000551316 GTPBP10A4D1E9 387 aaKnown RBP12.77□□□□□ -0.37
SNRPF-203ENST00000551316 GAPDHSO14556 408 aaPredicted RBP12.77□□□□□ -0.37
SNRPF-203ENST00000551316 MFSD11O43934 449 aa12.77□□□□□ -0.37
SNRPF-203ENST00000551316 TPBGLP0DKB5 382 aa12.77□□□□□ -0.37
SNRPF-203ENST00000551316 CD96P40200 585 aa12.77□□□□□ -0.37
SNRPF-203ENST00000551316 CD86P42081 329 aa12.77□□□□□ -0.37
SNRPF-203ENST00000551316 RAB28P51157 221 aa12.77□□□□□ -0.37
SNRPF-203ENST00000551316 CDR2Q01850 454 aa12.77□□□□□ -0.37
SNRPF-203ENST00000551316 PRKG2Q13237 762 aa12.77□□□□□ -0.37
SNRPF-203ENST00000551316 FLYWCH1Q4VC44 716 aa12.77□□□□□ -0.37
SNRPF-203ENST00000551316 ERMARDQ5T6L9 678 aa12.77□□□□□ -0.37
SNRPF-203ENST00000551316 DNAJC24Q6P3W2 148 aa12.77□□□□□ -0.37
SNRPF-203ENST00000551316 MICALCLQ6ZW33 695 aa12.77□□□□□ -0.37
SNRPF-203ENST00000551316 AMIGO1Q86WK6 493 aa12.77□□□□□ -0.37
SNRPF-203ENST00000551316 MAML1Q92585 1016 aa12.77□□□□□ -0.37
SNRPF-203ENST00000551316 SLCO2A1Q92959 643 aa12.77□□□□□ -0.37
SNRPF-203ENST00000551316 SLC24A3Q9HC58 644 aa12.77□□□□□ -0.37
SNRPF-203ENST00000551316 CFAP45Q9UL16 551 aa12.77□□□□□ -0.37
SNRPF-203ENST00000551316 PLCL2Q9UPR0 1127 aa12.77□□□□□ -0.37
SNRPF-203ENST00000551316 VPS9D1Q9Y2B5 631 aa12.77□□□□□ -0.37
SNRPF-203ENST00000551316 NBEAL2Q6ZNJ1 2754 aa12.76□□□□□ -0.37
SNRPF-203ENST00000551316 A0A0G2JNJ9 132 aa12.76□□□□□ -0.37
SNRPF-203ENST00000551316 MGAT4DA6NG13 374 aa12.76□□□□□ -0.37
SNRPF-203ENST00000551316 MAP3K7O43318 606 aa12.76□□□□□ -0.37
SNRPF-203ENST00000551316 KCNJ13O60928 360 aa12.76□□□□□ -0.37
SNRPF-203ENST00000551316 NEURL1O76050 574 aa12.76□□□□□ -0.37
SNRPF-203ENST00000551316 MLYCDO95822 493 aa12.76□□□□□ -0.37
SNRPF-203ENST00000551316 GNA14O95837 355 aa12.76□□□□□ -0.37
SNRPF-203ENST00000551316 NDUFS1P28331 727 aa12.76□□□□□ -0.37
SNRPF-203ENST00000551316 ADH7P40394 386 aa12.76□□□□□ -0.37
SNRPF-203ENST00000551316 GSE1Q14687 1217 aa12.76□□□□□ -0.37
SNRPF-203ENST00000551316 NOMO1Q15155 1222 aa12.76□□□□□ -0.37
SNRPF-203ENST00000551316 POU4F3Q15319 338 aa12.76□□□□□ -0.37
SNRPF-203ENST00000551316 GPRC6AQ5T6X5 926 aa12.76□□□□□ -0.37
SNRPF-203ENST00000551316 ZNF468Q5VIY5 522 aaPredicted RBP12.76□□□□□ -0.37
SNRPF-203ENST00000551316 TMCO3Q6UWJ1 677 aa12.76□□□□□ -0.37
SNRPF-203ENST00000551316 RIPOR1Q6ZS17 1223 aa12.76□□□□□ -0.37
SNRPF-203ENST00000551316 EID3Q8N140 333 aa12.76□□□□□ -0.37
SNRPF-203ENST00000551316 DDHD1Q8NEL9 900 aa12.76□□□□□ -0.37
SNRPF-203ENST00000551316 SMARCE1Q969G3 411 aa12.76□□□□□ -0.37
SNRPF-203ENST00000551316 RBM41Q96IZ5 413 aaKnown RBP12.76□□□□□ -0.37
SNRPF-203ENST00000551316 FERD3LQ96RJ6 166 aa12.76□□□□□ -0.37
SNRPF-203ENST00000551316 CHRNA10Q9GZZ6 450 aa12.76□□□□□ -0.37
SNRPF-203ENST00000551316 Q9UFV3 132 aa12.76□□□□□ -0.37
SNRPF-203ENST00000551316 RYR3Q15413 4870 aa12.76□□□□□ -0.37
SNRPF-203ENST00000551316 IGHV3-20A0A0C4DH32 117 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 A0A0J9YY10 115 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 A8MUI8 341 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 IDSB3KWA1 339 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 PRPSAP2O60256 369 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 NRP2O60462 931 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 GFPT2O94808 682 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 ABCA1O95477 2261 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 MAGP20916 626 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 IL1R2P27930 398 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 MIPP30301 263 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 CARSP49589 748 aaKnown RBP12.75□□□□□ -0.37
SNRPF-203ENST00000551316 FANCCQ00597 558 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 KRT33BQ14525 404 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 CMPK2Q5EBM0 449 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 ATL3Q6DD88 541 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 TMEM211Q6ICI0 200 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 PODNL1Q6PEZ8 512 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 RAI1Q7Z5J4 1906 aaPredicted RBP12.75□□□□□ -0.37
SNRPF-203ENST00000551316 YTHDF3Q7Z739 585 aaKnown RBP12.75□□□□□ -0.37
SNRPF-203ENST00000551316 ZNF227Q86WZ6 799 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 CRLF3Q8IUI8 442 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 CREBRFQ8IUR6 639 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 FMR1NBQ8N0W7 255 aaPredicted RBP12.75□□□□□ -0.37
SNRPF-203ENST00000551316 OR2L2Q8NH16 312 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 ZNF592Q92610 1267 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 DLG3Q92796 817 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 MIEF2Q96C03 454 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 IMMP1LQ96LU5 166 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 CSPG4P5Q96PW8 444 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 TP63Q9H3D4 680 aaPredicted RBP12.75□□□□□ -0.37
SNRPF-203ENST00000551316 TFB2MQ9H5Q4 396 aaKnown RBP12.75□□□□□ -0.37
SNRPF-203ENST00000551316 IL26Q9NPH9 171 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 RIC8BQ9NVN3 520 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms