RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 MELKQ14680 651 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 MVPQ14764 893 aaKnown RBP5.17□□□□□ -1.58
CPSF6-206ENST00000550987 SLMAPQ14BN4 828 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 EFNB3Q15768 340 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 PRTGQ2VWP7 1150 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 ATP13A5Q4VNC0 1218 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 NHSL2Q5HYW2 709 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 FNBP1LQ5T0N5 605 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 C11orf57Q6ZUT1 292 aaPredicted RBP5.17□□□□□ -1.58
CPSF6-206ENST00000550987 RAPH1Q70E73 1250 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 ZNF843Q8N446 348 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 SLC5A8Q8N695 610 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 ARFGAP1Q8N6T3 406 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 CTCFLQ8NI51 663 aaPredicted RBP5.17□□□□□ -1.58
CPSF6-206ENST00000550987 MGARPQ8TDB4 240 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 PPP4R1Q8TF05 950 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 TAAR8Q969N4 342 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 CHFRQ96EP1 664 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 HES6Q96HZ4 224 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 TXNDC15Q96J42 360 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 PRMT6Q96LA8 375 aaPredicted RBP5.17□□□□□ -1.58
CPSF6-206ENST00000550987 SEPHS2Q99611 448 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 CMKLR1Q99788 373 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 MOV10L1Q9BXT6 1211 aaKnown RBP5.17□□□□□ -1.58
CPSF6-206ENST00000550987 EQTNQ9NQ60 294 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 DPP3Q9NY33 737 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 DNAJB9Q9UBS3 223 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 AK9Q5TCS8 1911 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 NBEAL1Q6ZS30 2694 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 RP1L1Q8IWN7 2480 aaPredicted RBP5.16□□□□□ -1.58
CPSF6-206ENST00000550987 IGLV5-39A0A0G2JS06 123 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 BECN2A8MW95 431 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 ANKRD28O15084 1053 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 EPN2O95208 641 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 CH25HO95992 272 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 FGBP02675 491 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 ACVRL1P37023 503 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 APOBEC1P41238 236 aaKnown RBP5.16□□□□□ -1.58
CPSF6-206ENST00000550987 MTHFRP42898 656 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 NUDT6P53370 316 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 TAS2R38P59533 333 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 CDK3Q00526 305 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 PDE1BQ01064 536 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 PPATQ06203 517 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 MZT1Q08AG7 82 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 ACSM1Q08AH1 577 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 PLA2G7Q13093 441 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 RBMS2Q15434 407 aaKnown RBP5.16□□□□□ -1.58
CPSF6-206ENST00000550987 SYT16Q17RD7 645 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 VWC2Q2TAL6 325 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 AMZ1Q400G9 498 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 GLIPR1L2Q4G1C9 344 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 PXDC1Q5TGL8 231 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 C18orf63Q68DL7 685 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 WDR73Q6P4I2 378 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 FIGLAQ6QHK4 219 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 MOXD1Q6UVY6 613 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 PIWIL3Q7Z3Z3 882 aaKnown RBP5.16□□□□□ -1.58
CPSF6-206ENST00000550987 CARNMT1Q8N4J0 409 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 C16orf52Q8NHV5 167 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 ZFAND2BQ8WV99 257 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 OIT3Q8WWZ8 545 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 ROBO4Q8WZ75 1007 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 SLAMF9Q96A28 289 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 FAM81BQ96LP2 452 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 MTERF1Q99551 399 aaKnown RBP5.16□□□□□ -1.58
CPSF6-206ENST00000550987 FNDC11Q9BVV2 318 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 WDR26Q9H7D7 661 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 DBNDD1Q9H9R9 158 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 CHCHD3Q9NX63 227 aaKnown RBP5.16□□□□□ -1.58
CPSF6-206ENST00000550987 MCM9Q9NXL9 1143 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 ARMCX3Q9UH62 379 aaPredicted RBP5.16□□□□□ -1.58
CPSF6-206ENST00000550987 SNX9Q9Y5X1 595 aa5.16□□□□□ -1.58
CPSF6-206ENST00000550987 FANCMQ8IYD8 2048 aa5.15□□□□□ -1.58
CPSF6-206ENST00000550987 HTR3EA5X5Y0 456 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 SOCS6O14544 535 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 MEIS2O14770 477 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 XRCC3O43542 346 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 NDUFS7O75251 213 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 MOSPD3O75425 235 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 CREG1O75629 220 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 SRCP12931 536 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 MYOGP15173 224 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 UGT1A1P22309 533 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 C21orf33P30042 268 aaPredicted RBP5.15□□□□□ -1.59
CPSF6-206ENST00000550987 FASLGP48023 281 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 COL10A1Q03692 680 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 TRAF1Q13077 416 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 TUBB2AQ13885 445 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 NR1D2Q14995 579 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 ANGPT1Q15389 498 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 RNASEH2BQ5TBB1 312 aaKnown RBP5.15□□□□□ -1.59
CPSF6-206ENST00000550987 CASC1Q6TDU7 716 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 PCSK4Q6UW60 755 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 SPATA19Q7Z5L4 167 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 DZIP1Q86YF9 867 aaKnown RBP5.15□□□□□ -1.59
CPSF6-206ENST00000550987 GCSAMQ8N6F7 178 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 C10orf53Q8N6V4 93 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 GRK7Q8WTQ7 553 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 ATL1Q8WXF7 558 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms