RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 PVRP15151 417 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 PSMA3P25788 255 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 PDHA2P29803 388 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 NSG1P42857 185 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 PLOD1Q02809 727 aaPredicted RBP7.36□□□□□ -1.23
NEK3-201ENST00000550331 PRKG2Q13237 762 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 ATP1A4Q13733 1029 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 SPARCL1Q14515 664 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 INPP5JQ15735 1006 aaPredicted RBP7.36□□□□□ -1.23
NEK3-201ENST00000550331 PARP6Q2NL67 630 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 EIF2S3LQ2VIR3 472 aaKnown RBP7.36□□□□□ -1.23
NEK3-201ENST00000550331 P3H1Q32P28 736 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 PTCHD3Q3KNS1 767 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 ZRANB3Q5FWF4 1079 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 VWA5B1Q5TIE3 1220 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 FAM69BQ5VUD6 431 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 RHBDD2Q6NTF9 364 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 PACS1Q6VY07 963 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 ARHGEF18Q6ZSZ5 1173 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 MRGPREQ86SM8 312 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 HOOK3Q86VS8 718 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 SERPINA9Q86WD7 417 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 TMTC1Q8IUR5 882 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 CLDN19Q8N6F1 224 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 RBMXL3Q8N7X1 1067 aaKnown RBP7.36□□□□□ -1.23
NEK3-201ENST00000550331 C19orf47Q8N9M1 422 aaKnown RBP7.36□□□□□ -1.23
NEK3-201ENST00000550331 Q8NA96 180 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 RNF214Q8ND24 703 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 PHC3Q8NDX5 983 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 STYXQ8WUJ0 223 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 N4BP2L2Q92802 583 aaPredicted RBP7.36□□□□□ -1.23
NEK3-201ENST00000550331 TCTN2Q96GX1 697 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 CDKN2AIPNLQ96HQ2 116 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 SGSM3Q96HU1 749 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 FER1L6-AS2Q96M78 137 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 KLHL25Q9H0H3 589 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 LRRC40Q9H9A6 602 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 OR6C2Q9NZP2 312 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 POLG2Q9UHN1 485 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 ICKQ9UPZ9 632 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 SETD2Q9BYW2 2564 aaPredicted RBP7.36□□□□□ -1.23
NEK3-201ENST00000550331 DIDO1Q9BTC0 2240 aaKnown RBP7.36□□□□□ -1.23
NEK3-201ENST00000550331 A0A0J9YY10 115 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 GOLGA6L9A6NEM1 432 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 MROH6A6NGR9 719 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 A6NL46 340 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 F8W8V4 182 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 PEX12O00623 359 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 ZSCAN9O15535 394 aaPredicted RBP7.35□□□□□ -1.23
NEK3-201ENST00000550331 KDM1AO60341 852 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 IPO13O94829 963 aaKnown RBP7.35□□□□□ -1.23
NEK3-201ENST00000550331 METTL18O95568 372 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 AP2A1O95782 977 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 THBS1P07996 1170 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 CHRM5P08912 532 aaPredicted RBP7.35□□□□□ -1.23
NEK3-201ENST00000550331 UGT2B7P16662 529 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 ACADLP28330 430 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 OTX2P32243 289 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 GABRA4P48169 554 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 CDKN1CP49918 316 aaPredicted RBP7.35□□□□□ -1.23
NEK3-201ENST00000550331 SOX8P57073 446 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 MRPL49Q13405 166 aaKnown RBP7.35□□□□□ -1.23
NEK3-201ENST00000550331 SSPNQ14714 243 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 MYBPC3Q14896 1274 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 PRR30Q53SZ7 412 aaPredicted RBP7.35□□□□□ -1.23
NEK3-201ENST00000550331 C1QL3Q5VWW1 255 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 TLDC1Q6P9B6 456 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 IGFL3Q6UXB1 125 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 UNC5AQ6ZN44 842 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 TAS2R42Q7RTR8 314 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 PIANPQ8IYJ0 282 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 TBC1D21Q8IYX1 336 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 CLEC1AQ8NC01 280 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 OR5AR1Q8NGP9 310 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 OR2Y1Q8NGV0 311 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 OR5K2Q8NHB8 316 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 FLVCR1-AS1Q8TAF5 88 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 ALG3Q92685 438 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 NACC2Q96BF6 587 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 GBP5Q96PP8 586 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 ALS2CR12Q96Q35 445 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 OR2A14Q96R47 310 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 NRTNQ99748 197 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 FAM118BQ9BPY3 351 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 AP1M1Q9BXS5 423 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 XKR8Q9H6D3 395 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 FAM60AQ9NP50 221 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 SMARCAL1Q9NZC9 954 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 NDOR1Q9UHB4 597 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 GPN3Q9UHW5 284 aaPredicted RBP7.35□□□□□ -1.23
NEK3-201ENST00000550331 ASF1AQ9Y294 204 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 B3GNT3Q9Y2A9 372 aa7.35□□□□□ -1.23
NEK3-201ENST00000550331 EPN1Q9Y6I3 576 aaPredicted RBP7.35□□□□□ -1.23
NEK3-201ENST00000550331 OTOGQ6ZRI0 2925 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 SLC5A10A0PJK1 596 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 CCDC78A2IDD5 438 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 GRID2IPA4D2P6 1211 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 PSMD3O43242 534 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 LDLRP01130 860 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 PTMAP06454 111 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms