RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 ZNF385CQ66K41 422 aaPredicted RBP10.48□□□□□ -0.73
VTI1BP3-201ENST00000550220 LCN10Q6JVE6 187 aa10.48□□□□□ -0.73
VTI1BP3-201ENST00000550220 NAPRTQ6XQN6 538 aa10.48□□□□□ -0.73
VTI1BP3-201ENST00000550220 LRRC8AQ8IWT6 810 aa10.48□□□□□ -0.73
VTI1BP3-201ENST00000550220 GLIS1Q8NBF1 620 aa10.48□□□□□ -0.73
VTI1BP3-201ENST00000550220 CFAP61Q8NHU2 1237 aa10.48□□□□□ -0.73
VTI1BP3-201ENST00000550220 FLVCR1-AS1Q8TAF5 88 aa10.48□□□□□ -0.73
VTI1BP3-201ENST00000550220 SKA2Q8WVK7 121 aaPredicted RBP10.48□□□□□ -0.73
VTI1BP3-201ENST00000550220 MIB2Q96AX9 1013 aa10.48□□□□□ -0.73
VTI1BP3-201ENST00000550220 VPS50Q96JG6 964 aa10.48□□□□□ -0.73
VTI1BP3-201ENST00000550220 GBP5Q96PP8 586 aa10.48□□□□□ -0.73
VTI1BP3-201ENST00000550220 NAP1L3Q99457 506 aaPredicted RBP10.48□□□□□ -0.73
VTI1BP3-201ENST00000550220 TRIM55Q9BYV6 548 aa10.48□□□□□ -0.73
VTI1BP3-201ENST00000550220 SPRTNQ9H040 489 aaPredicted RBP10.48□□□□□ -0.73
VTI1BP3-201ENST00000550220 P2RY12Q9H244 342 aa10.48□□□□□ -0.73
VTI1BP3-201ENST00000550220 ENAMQ9NRM1 1142 aa10.48□□□□□ -0.73
VTI1BP3-201ENST00000550220 EURLQ9NYK6 297 aa10.48□□□□□ -0.73
VTI1BP3-201ENST00000550220 IFT80Q9P2H3 777 aaPredicted RBP10.48□□□□□ -0.73
VTI1BP3-201ENST00000550220 CDYLQ9Y232 598 aa10.48□□□□□ -0.73
VTI1BP3-201ENST00000550220 NBASA2RRP1 2371 aa10.48□□□□□ -0.73
VTI1BP3-201ENST00000550220 ZNF106Q9H2Y7 1883 aaKnown RBP10.48□□□□□ -0.73
VTI1BP3-201ENST00000550220 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 IQCF5A8MTL0 148 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 H3BMH7 237 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 K7EM74 188 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 VPS4BO75351 444 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 KLF7O75840 302 aaPredicted RBP10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 IPO13O94829 963 aaKnown RBP10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 ONECUT2O95948 504 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 ALBP02768 609 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 ESR1P03372 595 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 ALPPP05187 535 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 CBSLP0DN79 551 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 ATP5DP30049 168 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 CBSP35520 551 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 HSD17B2P37059 387 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 SEMA3AQ14563 771 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 GRM7Q14831 915 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 FAM214AQ32MH5 1076 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 NKAIN1Q4KMZ8 207 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 PRUNE1Q86TP1 453 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 TRIM73Q86UV7 250 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 MCATQ8IVS2 390 aaKnown RBP10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 ZBTB2Q8N680 514 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 OTUD6BQ8N6M0 293 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 ZNF655Q8N720 491 aaPredicted RBP10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 CLEC1AQ8NC01 280 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 OR2Y1Q8NGV0 311 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 HMGCLL1Q8TB92 370 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 PBKQ96KB5 322 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 NRTNQ99748 197 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 GPR83Q9NYM4 423 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 TTC7AQ9ULT0 858 aaPredicted RBP10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 PLAGL1Q9UM63 463 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 VPS4AQ9UN37 437 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 SOX13Q9UN79 622 aa10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 SETXQ7Z333 2677 aaKnown RBP10.47□□□□□ -0.73
VTI1BP3-201ENST00000550220 RP1L1Q8IWN7 2480 aaPredicted RBP10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 ZNF839A8K0R7 811 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 PHF2O75151 1096 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 VAPBO95292 243 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 C1orf105O95561 183 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 MLNP12872 115 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 NR1D1P20393 614 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 ITGAXP20702 1163 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 OGNP20774 298 aaKnown RBP10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 MAGP20916 626 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 ALAS2P22557 587 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 NMBRP28336 390 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 MAGEA6P43360 314 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 COLEC12Q5KU26 742 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 CPZQ66K79 652 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 KIAA0930Q6ICG6 404 aaPredicted RBP10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 MRPL14Q6P1L8 145 aaKnown RBP10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 FIGLAQ6QHK4 219 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 LDB1Q86U70 411 aaPredicted RBP10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 VRK3Q8IV63 474 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 LMNTD2Q8IXW0 634 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 KRT222Q8N1A0 295 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 FAM26EQ8N5C1 309 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 LMNTD1Q8N9Z9 388 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 TTC29Q8NA56 475 aaPredicted RBP10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 LINC01555Q8NAE3 123 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 GALNT11Q8NCW6 608 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 CPT1CQ8TCG5 803 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 TM9SF4Q92544 642 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 FKBP10Q96AY3 582 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 SMAD5Q99717 465 aaKnown RBP10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 MENTQ9BUN1 341 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 WDR54Q9H977 334 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 XAB2Q9HCS7 855 aaKnown RBP10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 UTP6Q9NYH9 597 aaKnown RBP10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 SPATA7Q9P0W8 599 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 SAMD15Q9P1V8 674 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 MARCH4Q9P2E8 410 aaPredicted RBP10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 KLHL42Q9P2K6 505 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 NXT1Q9UKK6 140 aaKnown RBP10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 PTRH2Q9Y3E5 179 aaKnown RBP10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 JRKLQ9Y4A0 524 aa10.46□□□□□ -0.73
VTI1BP3-201ENST00000550220 KLK4Q9Y5K2 254 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms