RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 SH2D2AQ9NP31 389 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 ACSS1Q9NUB1 689 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-212ENST00000549162 TUBD1Q9UJT1 453 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 CLCA2Q9UQC9 943 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 ITM2BQ9Y287 266 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 TNRC18O15417 2968 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-212ENST00000549162 GOLGA6L7A0A1B0GV03 622 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 A0A1B0GVC2 190 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 A0A1W2PNR3 127 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 A0A1W2PPC4 97 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 CENPBD1B2RD01 187 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 C2CD4DB7Z1M9 353 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 ADAM10O14672 748 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 TRANK1O15050 2925 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 TAPBPO15533 448 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 GRID2O43424 1007 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 FMO6PO60774 539 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 RPN2P04844 631 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 CD1AP06126 327 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 EZRP15311 586 aaKnown RBP4.75□□□□□ -1.65
SCAF11-212ENST00000549162 CD19P15391 556 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 DGKAP23743 735 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 EPHB2P29323 1055 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 GRK6P43250 576 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 LIMS1P48059 325 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 RAD51Q06609 339 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 ISXQ2M1V0 245 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 HYAL4Q2M3T9 481 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 PRTGQ2VWP7 1150 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 GLYR1Q49A26 553 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-212ENST00000549162 CES4AQ5XG92 561 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 SLC6A19Q695T7 634 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 SCARA5Q6ZMJ2 495 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 LYSMD3Q7Z3D4 306 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 GRAMD2AQ8IUY3 354 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 ARID3BQ8IVW6 561 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-212ENST00000549162 APCDD1Q8J025 514 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 MFSD9Q8NBP5 474 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 ACBD4Q8NC06 268 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 CCDC110Q8TBZ0 833 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-212ENST00000549162 SMG7Q92540 1137 aaKnown RBP4.75□□□□□ -1.65
SCAF11-212ENST00000549162 SLC41A2Q96JW4 573 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 PPM1MQ96MI6 270 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 DDA1Q9BW61 102 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 ZFAND3Q9H8U3 227 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 GORASP2Q9H8Y8 452 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 VPS37BQ9H9H4 285 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 OR6C2Q9NZP2 312 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 PISDQ9UG56 409 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 PILRBQ9UKJ0 227 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 NFU1Q9UMS0 254 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 SATB2Q9UPW6 733 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 WASF3Q9UPY6 502 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 SH3BP1Q9Y3L3 701 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 STON1Q9Y6Q2 735 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 ESRRBO95718 433 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 UROSP10746 265 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 ATP1B2P14415 290 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-212ENST00000549162 JUPP14923 745 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 OR1E1P30953 314 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 ACVRL1P37023 503 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 LSM11P83369 360 aaKnown RBP eCLIP4.75□□□□□ -1.65
SCAF11-212ENST00000549162 CHAF1BQ13112 559 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 SLC29A2Q14542 456 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 HECTD2Q5U5R9 776 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 MAMDC2Q7Z304 686 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-212ENST00000549162 TBC1D1Q86TI0 1168 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-212ENST00000549162 PAQR7Q86WK9 346 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 BEND7Q8N7W2 519 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-212ENST00000549162 ZNF441Q8N8Z8 693 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 CREB3L4Q8TEY5 395 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 FGF11Q92914 225 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 UBE2E3Q969T4 207 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 CTHRC1Q96CG8 243 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 SERAC1Q96JX3 654 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 SLX1AQ9BQ83 275 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 CD244Q9BZW8 370 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 RNF32Q9H0A6 362 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 WDR54Q9H977 334 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 C11orf16Q9NQ32 467 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 SNX15Q9NRS6 342 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 TMEM184CQ9NVA4 438 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 ARMC1Q9NVT9 282 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 RBM22Q9NW64 420 aaKnown RBP eCLIP4.75□□□□□ -1.65
SCAF11-212ENST00000549162 SMARCAL1Q9NZC9 954 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 ZC3H7BQ9UGR2 993 aaKnown RBP4.75□□□□□ -1.65
SCAF11-212ENST00000549162 FBXO5Q9UKT4 447 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 TTC24A2A3L6 582 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-212ENST00000549162 VSTM2BA6NLU5 285 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 TRPC5OSA6NMA1 111 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 C16orf96A6NNT2 1141 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 SLC28A1O00337 649 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 PRMT5O14744 637 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-212ENST00000549162 SNPHO15079 494 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 SCN2BO60939 215 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 SRGAP2O75044 1071 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 GOSR1O95249 250 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 CEACAM5P06731 702 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 THRBP10828 461 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms