RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 CD9P21926 228 aa15.23■□□□□ 0.03
DDX54-205ENST00000548786 PSMB5P28074 263 aa15.23■□□□□ 0.03
DDX54-205ENST00000548786 RHDQ02161 417 aa15.23■□□□□ 0.03
DDX54-205ENST00000548786 ABHD18Q0P651 414 aa15.23■□□□□ 0.03
DDX54-205ENST00000548786 TSTA3Q13630 321 aaPredicted RBP15.23■□□□□ 0.03
DDX54-205ENST00000548786 GBX1Q14549 363 aa15.23■□□□□ 0.03
DDX54-205ENST00000548786 KIR2DS3Q14952 304 aa15.23■□□□□ 0.03
DDX54-205ENST00000548786 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.23■□□□□ 0.03
DDX54-205ENST00000548786 C16orf46Q6P387 395 aa15.23■□□□□ 0.03
DDX54-205ENST00000548786 CPNE9Q8IYJ1 553 aa15.23■□□□□ 0.03
DDX54-205ENST00000548786 CARFQ8N187 725 aa15.23■□□□□ 0.03
DDX54-205ENST00000548786 C2CD4AQ8NCU7 369 aaPredicted RBP15.23■□□□□ 0.03
DDX54-205ENST00000548786 CT55Q8WUE5 264 aa15.23■□□□□ 0.03
DDX54-205ENST00000548786 SNRNP27Q8WVK2 155 aaKnown RBP15.23■□□□□ 0.03
DDX54-205ENST00000548786 ZNF592Q92610 1267 aa15.23■□□□□ 0.03
DDX54-205ENST00000548786 RAD51AP1Q96B01 352 aa15.23■□□□□ 0.03
DDX54-205ENST00000548786 RUFY1Q96T51 708 aa15.23■□□□□ 0.03
DDX54-205ENST00000548786 LATS2Q9NRM7 1088 aa15.23■□□□□ 0.03
DDX54-205ENST00000548786 IRAK4Q9NWZ3 460 aa15.23■□□□□ 0.03
DDX54-205ENST00000548786 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.23■□□□□ 0.03
DDX54-205ENST00000548786 SNRNP200O75643 2136 aaKnown RBP15.23■□□□□ 0.03
DDX54-205ENST00000548786 ARHGEF33A8MVX0 844 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 ERVH48-1M5A8F1 160 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 ATXN7O15265 892 aaPredicted RBP15.22■□□□□ 0.03
DDX54-205ENST00000548786 CPNE3O75131 537 aaKnown RBP15.22■□□□□ 0.03
DDX54-205ENST00000548786 SYF2O95926 243 aaKnown RBP15.22■□□□□ 0.03
DDX54-205ENST00000548786 CTSBP07858 339 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 CCNYL3P0C7X3 344 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 CYP2A7P20853 494 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 MAGP20916 626 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 GABRB3P28472 473 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 PGGT1BP53609 377 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 TTLL9Q3SXZ7 439 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 RBM20Q5T481 1227 aaKnown RBP15.22■□□□□ 0.03
DDX54-205ENST00000548786 PIWIL4Q7Z3Z4 852 aaKnown RBP15.22■□□□□ 0.03
DDX54-205ENST00000548786 LMNTD2Q8IXW0 634 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 SLC38A9Q8NBW4 561 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 FBXO36Q8NEA4 188 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 OR2L8Q8NGY9 312 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 CD200R1Q8TD46 325 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 DENND1AQ8TEH3 1009 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 STARD8Q92502 1023 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 SLC39A7Q92504 469 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 TTC9Q92623 222 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 KCNJ9Q92806 393 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 MR1Q95460 341 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 CLIP3Q96DZ5 547 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 NAT9Q9BTE0 207 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 AARSD1Q9BTE6 412 aaKnown RBP15.22■□□□□ 0.03
DDX54-205ENST00000548786 SLC12A9Q9BXP2 914 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 ABCF3Q9NUQ8 709 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 TEX264Q9Y6I9 313 aa15.22■□□□□ 0.03
DDX54-205ENST00000548786 ZNF891A8MT65 544 aaPredicted RBP15.21■□□□□ 0.03
DDX54-205ENST00000548786 VPS26AO75436 327 aa15.21■□□□□ 0.03
DDX54-205ENST00000548786 URI1O94763 535 aaPredicted RBP15.21■□□□□ 0.03
DDX54-205ENST00000548786 MATN4O95460 622 aa15.21■□□□□ 0.03
DDX54-205ENST00000548786 SPTBP11277 2137 aa15.21■□□□□ 0.03
DDX54-205ENST00000548786 TCN2P20062 427 aa15.21■□□□□ 0.03
DDX54-205ENST00000548786 MCM3P25205 808 aa15.21■□□□□ 0.03
DDX54-205ENST00000548786 ATP5DP30049 168 aa15.21■□□□□ 0.03
DDX54-205ENST00000548786 CCNFP41002 786 aa15.21■□□□□ 0.03
DDX54-205ENST00000548786 CDKN2DP55273 166 aa15.21■□□□□ 0.03
DDX54-205ENST00000548786 CALCOCO2Q13137 446 aa15.21■□□□□ 0.03
DDX54-205ENST00000548786 GPS2Q13227 327 aa15.21■□□□□ 0.03
DDX54-205ENST00000548786 MAP7Q14244 749 aa15.21■□□□□ 0.03
DDX54-205ENST00000548786 FASTKQ14296 549 aaKnown RBP15.21■□□□□ 0.03
DDX54-205ENST00000548786 SF1Q15637 639 aaKnown RBP15.21■□□□□ 0.03
DDX54-205ENST00000548786 SLC5A12Q1EHB4 618 aa15.21■□□□□ 0.03
DDX54-205ENST00000548786 MAATS1Q7Z4T9 603 aa15.21■□□□□ 0.03
DDX54-205ENST00000548786 ZBED8Q8IZ13 594 aa15.21■□□□□ 0.03
DDX54-205ENST00000548786 RAB42Q8N4Z0 105 aa15.21■□□□□ 0.03
DDX54-205ENST00000548786 GPATCH11Q8N954 259 aa15.21■□□□□ 0.03
DDX54-205ENST00000548786 TCTN2Q96GX1 697 aa15.21■□□□□ 0.03
DDX54-205ENST00000548786 MIPEPQ99797 713 aa15.21■□□□□ 0.03
DDX54-205ENST00000548786 ERP44Q9BS26 406 aa15.21■□□□□ 0.03
DDX54-205ENST00000548786 ACAT2Q9BWD1 397 aa15.21■□□□□ 0.03
DDX54-205ENST00000548786 SLC7A5P2Q9GIP4 190 aa15.21■□□□□ 0.03
DDX54-205ENST00000548786 LHX9Q9NQ69 397 aa15.21■□□□□ 0.03
DDX54-205ENST00000548786 TRMT6Q9UJA5 497 aaKnown RBP15.21■□□□□ 0.03
DDX54-205ENST00000548786 PADI1Q9ULC6 663 aa15.21■□□□□ 0.03
DDX54-205ENST00000548786 FAM187AA6NFU0 413 aa15.2■□□□□ 0.02
DDX54-205ENST00000548786 SMAPO00193 183 aa15.2■□□□□ 0.02
DDX54-205ENST00000548786 PIAS1O75925 651 aa15.2■□□□□ 0.02
DDX54-205ENST00000548786 AHSGP02765 367 aa15.2■□□□□ 0.02
DDX54-205ENST00000548786 MT-ND3P03897 115 aa15.2■□□□□ 0.02
DDX54-205ENST00000548786 FAM87AP0C7U9 286 aa15.2■□□□□ 0.02
DDX54-205ENST00000548786 GRIA3P42263 894 aa15.2■□□□□ 0.02
DDX54-205ENST00000548786 ITGA1P56199 1179 aa15.2■□□□□ 0.02
DDX54-205ENST00000548786 RPS18P62269 152 aaKnown RBP15.2■□□□□ 0.02
DDX54-205ENST00000548786 DNASE1L3Q13609 305 aa15.2■□□□□ 0.02
DDX54-205ENST00000548786 TBR1Q16650 682 aa15.2■□□□□ 0.02
DDX54-205ENST00000548786 PTCHD3Q3KNS1 767 aa15.2■□□□□ 0.02
DDX54-205ENST00000548786 TEDDM1Q5T9Z0 273 aa15.2■□□□□ 0.02
DDX54-205ENST00000548786 STEAP4Q687X5 459 aa15.2■□□□□ 0.02
DDX54-205ENST00000548786 LCN10Q6JVE6 187 aa15.2■□□□□ 0.02
DDX54-205ENST00000548786 SUSD1Q6UWL2 747 aa15.2■□□□□ 0.02
DDX54-205ENST00000548786 BPHLQ86WA6 291 aaPredicted RBP15.2■□□□□ 0.02
DDX54-205ENST00000548786 PPFIBP2Q8ND30 876 aa15.2■□□□□ 0.02
DDX54-205ENST00000548786 OR8K5Q8NH50 307 aa15.2■□□□□ 0.02
DDX54-205ENST00000548786 GABPB2Q8TAK5 448 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms