RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 CHRNA10Q9GZZ6 450 aa15.83■□□□□ 0.12
SSH1-208ENST00000548522 ARNT2Q9HBZ2 717 aa15.83■□□□□ 0.12
SSH1-208ENST00000548522 ATP13A2Q9NQ11 1180 aa15.83■□□□□ 0.12
SSH1-208ENST00000548522 NLE1Q9NVX2 485 aaPredicted RBP15.83■□□□□ 0.12
SSH1-208ENST00000548522 SRPK3Q9UPE1 567 aa15.83■□□□□ 0.12
SSH1-208ENST00000548522 OSGIN2Q9Y236 505 aa15.83■□□□□ 0.12
SSH1-208ENST00000548522 EPN1Q9Y6I3 576 aaPredicted RBP15.83■□□□□ 0.12
SSH1-208ENST00000548522 AKAP9Q99996 3911 aa15.83■□□□□ 0.12
SSH1-208ENST00000548522 PCM1Q15154 2024 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 CCDC88CQ9P219 2028 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 ISM1B1AKI9 464 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 H7C0S8 307 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 SOCS6O14544 535 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 KIF5CO60282 957 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 IGHEP01854 428 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 ALAS2P22557 587 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 MCM3P25205 808 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 MAGEA1P43355 309 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 CSE1LP55060 971 aaKnown RBP15.82■□□□□ 0.12
SSH1-208ENST00000548522 CACNG1Q06432 222 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 AIMP2Q13155 320 aaKnown RBP15.82■□□□□ 0.12
SSH1-208ENST00000548522 KCTD11Q693B1 232 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 TLDC1Q6P9B6 456 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 DARS2Q6PI48 645 aaKnown RBP15.82■□□□□ 0.12
SSH1-208ENST00000548522 TTLL10Q6ZVT0 673 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 TAX1BP1Q86VP1 789 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 KLHDC8BQ8IXV7 354 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 TBC1D21Q8IYX1 336 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 C2orf73Q8N5S3 287 aaPredicted RBP15.82■□□□□ 0.12
SSH1-208ENST00000548522 METTL27Q8N6F8 245 aaPredicted RBP15.82■□□□□ 0.12
SSH1-208ENST00000548522 LINC01555Q8NAE3 123 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 OR5K2Q8NHB8 316 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 GRHL3Q8TE85 626 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 CDKN2AIPNLQ96HQ2 116 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 SPSB2Q99619 263 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 EURLQ9NYK6 297 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 OR6C2Q9NZP2 312 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 CTSFQ9UBX1 484 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 CDC23Q9UJX2 597 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 PLCL2Q9UPR0 1127 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 HS3ST3B1Q9Y662 390 aa15.82■□□□□ 0.12
SSH1-208ENST00000548522 SLC5A10A0PJK1 596 aa15.81■□□□□ 0.12
SSH1-208ENST00000548522 ARHGAP10A1A4S6 786 aa15.81■□□□□ 0.12
SSH1-208ENST00000548522 LIN7AO14910 233 aaPredicted RBP15.81■□□□□ 0.12
SSH1-208ENST00000548522 ZG16O60844 167 aa15.81■□□□□ 0.12
SSH1-208ENST00000548522 SNRNP200O75643 2136 aaKnown RBP15.81■□□□□ 0.12
SSH1-208ENST00000548522 IPO7O95373 1038 aaKnown RBP15.81■□□□□ 0.12
SSH1-208ENST00000548522 SLU7O95391 586 aaKnown RBP15.81■□□□□ 0.12
SSH1-208ENST00000548522 METTL18O95568 372 aa15.81■□□□□ 0.12
SSH1-208ENST00000548522 MMP11P24347 488 aa15.81■□□□□ 0.12
SSH1-208ENST00000548522 CTNNA1P35221 906 aaKnown RBP15.81■□□□□ 0.12
SSH1-208ENST00000548522 SLC5A12Q1EHB4 618 aa15.81■□□□□ 0.12
SSH1-208ENST00000548522 PRAMEF13Q5VWM6 474 aa15.81■□□□□ 0.12
SSH1-208ENST00000548522 ZNF449Q6P9G9 518 aa15.81■□□□□ 0.12
SSH1-208ENST00000548522 KIRREL2Q6UWL6 708 aa15.81■□□□□ 0.12
SSH1-208ENST00000548522 SYT10Q6XYQ8 523 aa15.81■□□□□ 0.12
SSH1-208ENST00000548522 TAB3Q8N5C8 712 aaPredicted RBP15.81■□□□□ 0.12
SSH1-208ENST00000548522 PPP4R1Q8TF05 950 aa15.81■□□□□ 0.12
SSH1-208ENST00000548522 CNDP1Q96KN2 507 aa15.81■□□□□ 0.12
SSH1-208ENST00000548522 IL17FQ96PD4 163 aa15.81■□□□□ 0.12
SSH1-208ENST00000548522 C19orf43Q9BQ61 176 aa15.81■□□□□ 0.12
SSH1-208ENST00000548522 DIDO1Q9BTC0 2240 aaKnown RBP15.81■□□□□ 0.12
SSH1-208ENST00000548522 MENTQ9BUN1 341 aa15.81■□□□□ 0.12
SSH1-208ENST00000548522 OSBPL8Q9BZF1 889 aa15.81■□□□□ 0.12
SSH1-208ENST00000548522 SOX17Q9H6I2 414 aaPredicted RBP15.81■□□□□ 0.12
SSH1-208ENST00000548522 AGPAT4Q9NRZ5 378 aa15.81■□□□□ 0.12
SSH1-208ENST00000548522 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.81■□□□□ 0.12
SSH1-208ENST00000548522 A0A1B0GX78 115 aa15.8■□□□□ 0.12
SSH1-208ENST00000548522 OR1I1O60431 355 aa15.8■□□□□ 0.12
SSH1-208ENST00000548522 STK10O94804 968 aaKnown RBP15.8■□□□□ 0.12
SSH1-208ENST00000548522 AP2A2O94973 939 aa15.8■□□□□ 0.12
SSH1-208ENST00000548522 AP2A1O95782 977 aa15.8■□□□□ 0.12
SSH1-208ENST00000548522 CTNNA2P26232 953 aa15.8■□□□□ 0.12
SSH1-208ENST00000548522 PKLRP30613 574 aa15.8■□□□□ 0.12
SSH1-208ENST00000548522 FOXN2P32314 431 aa15.8■□□□□ 0.12
SSH1-208ENST00000548522 GRIA3P42263 894 aa15.8■□□□□ 0.12
SSH1-208ENST00000548522 NSG1P42857 185 aa15.8■□□□□ 0.12
SSH1-208ENST00000548522 Q0VFX4 171 aa15.8■□□□□ 0.12
SSH1-208ENST00000548522 NKG7Q16617 165 aa15.8■□□□□ 0.12
SSH1-208ENST00000548522 SYTL3Q4VX76 610 aa15.8■□□□□ 0.12
SSH1-208ENST00000548522 CCDC38Q502W7 563 aa15.8■□□□□ 0.12
SSH1-208ENST00000548522 IGFL2Q6UWQ7 119 aa15.8■□□□□ 0.12
SSH1-208ENST00000548522 VRK3Q8IV63 474 aa15.8■□□□□ 0.12
SSH1-208ENST00000548522 PARP9Q8IXQ6 854 aa15.8■□□□□ 0.12
SSH1-208ENST00000548522 LKAAEAR1Q8TD35 194 aa15.8■□□□□ 0.12
SSH1-208ENST00000548522 MARVELD3Q96A59 401 aa15.8■□□□□ 0.12
SSH1-208ENST00000548522 TSGA10Q9BZW7 698 aa15.8■□□□□ 0.12
SSH1-208ENST00000548522 ADGRG4Q8IZF6 3080 aa15.79■□□□□ 0.12
SSH1-208ENST00000548522 MDC1Q14676 2089 aaKnown RBP15.79■□□□□ 0.12
SSH1-208ENST00000548522 CCDC162PA2VCL2 907 aa15.79■□□□□ 0.12
SSH1-208ENST00000548522 MED26O95402 600 aa15.79■□□□□ 0.12
SSH1-208ENST00000548522 GSTM1P09488 218 aa15.79■□□□□ 0.12
SSH1-208ENST00000548522 CASQ1P31415 396 aa15.79■□□□□ 0.12
SSH1-208ENST00000548522 TSFMP43897 325 aaKnown RBP15.79■□□□□ 0.12
SSH1-208ENST00000548522 GSTM4Q03013 218 aa15.79■□□□□ 0.12
SSH1-208ENST00000548522 CDC16Q13042 620 aa15.79■□□□□ 0.12
SSH1-208ENST00000548522 ZNF169Q14929 603 aaPredicted RBP15.79■□□□□ 0.12
SSH1-208ENST00000548522 KIR2DS3Q14952 304 aa15.79■□□□□ 0.12
SSH1-208ENST00000548522 ZRSR2Q15696 482 aaKnown RBP15.79■□□□□ 0.12
SSH1-208ENST00000548522 PACS1Q6VY07 963 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms