RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 DDIT3P35638 169 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 DCTP40126 519 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 PGFP49763 221 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 MFAP3P55082 362 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 RPS14P62263 151 aaKnown RBP4.24□□□□□ -1.73
CBX5-203ENST00000547872 IRX6P78412 446 aaPredicted RBP4.24□□□□□ -1.73
CBX5-203ENST00000547872 GOLGA8FQ08AF8 430 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 GOLGA8DPQ0D2H9 430 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 MAPK7Q13164 816 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 KRT32Q14532 448 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 TWIST1Q15672 202 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 ISXQ2M1V0 245 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 ZNF260Q3ZCT1 412 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 GXYLT1Q4G148 440 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 RUNDC3AQ59EK9 446 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 SLC45A4Q5BKX6 768 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 PIK3CD-AS1Q5SR53 167 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 ADALQ6DHV7 355 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 GALNT17Q6IS24 598 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 GUSBP11Q6P575 273 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 SCARA5Q6ZMJ2 495 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 EFL1Q7Z2Z2 1120 aaKnown RBP4.24□□□□□ -1.73
CBX5-203ENST00000547872 IRF2BP2Q7Z5L9 587 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 IGFN1Q86VF2 1251 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 CCDC25Q86WR0 208 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 ARL14Q8N4G2 192 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 CSGALNACT2Q8N6G5 542 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 TMEM161BQ8NDZ6 487 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 OR2T3Q8NH03 318 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 DDI1Q8WTU0 396 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 SSC4DQ8WTU2 575 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 SAAL1Q96ER3 474 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 OMDQ99983 421 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 ACBD6Q9BR61 282 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 WDR83Q9BRX9 315 aaKnown RBP4.24□□□□□ -1.73
CBX5-203ENST00000547872 HERPUD2Q9BSE4 406 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 MTMR12Q9C0I1 747 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 CHODLQ9H9P2 273 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 PPCSQ9HAB8 311 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 TMEM30AQ9NV96 361 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 FBXL12Q9NXK8 326 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 THAP10Q9P2Z0 257 aaPredicted RBP4.24□□□□□ -1.73
CBX5-203ENST00000547872 ORC3Q9UBD5 711 aaPredicted RBP4.24□□□□□ -1.73
CBX5-203ENST00000547872 CLEC4EQ9ULY5 219 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 NCKAP1Q9Y2A7 1128 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 NFE2L3Q9Y4A8 694 aa4.24□□□□□ -1.73
CBX5-203ENST00000547872 NYNRINQ9P2P1 1898 aaKnown RBP4.24□□□□□ -1.73
CBX5-203ENST00000547872 GOLGA4Q13439 2230 aaKnown RBP4.23□□□□□ -1.73
CBX5-203ENST00000547872 TMEM272A0A1B0GTI8 110 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 TCRBV7S3A2A0A539 114 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 ANKRD63C9JTQ0 380 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 TLR4O00206 839 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 DFNA5O60443 496 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 FAM155BO75949 473 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 NEURL1O76050 574 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 NDUFB8O95169 186 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 OLFM2O95897 454 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 HLA-DQA2P01906 255 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 DHRS4L1P0CG22 281 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 PRLRP16471 622 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 ITIH1P19827 911 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 PNPLA4P41247 253 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 HALP42357 657 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 CYP2J2P51589 502 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 RHAGQ02094 409 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 ILKQ13418 452 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 TRIM29Q14134 588 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 TAF5Q15542 800 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 PRTGQ2VWP7 1150 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 DEFB133Q30KQ1 61 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 CFAP221Q4G0U5 840 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 SFMBT2Q5VUG0 894 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 ZNF776Q68DI1 518 aaPredicted RBP4.23□□□□□ -1.73
CBX5-203ENST00000547872 HMBOX1Q6NT76 420 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 MTFR2Q6P444 385 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 SLC39A4Q6P5W5 647 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 CHST9Q7L1S5 443 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 MOGAT3Q86VF5 341 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 ZFAND4Q86XD8 727 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 MMAAQ8IVH4 418 aaKnown RBP4.23□□□□□ -1.73
CBX5-203ENST00000547872 DIS3L2Q8IYB7 885 aaKnown RBP4.23□□□□□ -1.73
CBX5-203ENST00000547872 NKAPQ8N5F7 415 aaKnown RBP4.23□□□□□ -1.73
CBX5-203ENST00000547872 NECAB1Q8N987 351 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 FAM110DQ8TAY7 271 aaPredicted RBP4.23□□□□□ -1.73
CBX5-203ENST00000547872 POMGNT1Q8WZA1 660 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 SLC25A28Q96A46 364 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 SDCCAG3Q96C92 435 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 OTUB2Q96DC9 234 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 APOLD1Q96LR9 279 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 KCNK16Q96T55 309 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 PKMYT1Q99640 499 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 MRPL45Q9BRJ2 306 aaKnown RBP4.23□□□□□ -1.73
CBX5-203ENST00000547872 FAM213AQ9BRX8 229 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 SNX25Q9H3E2 840 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 PLEKHA2Q9HB19 425 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 WDR35Q9P2L0 1181 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 KLQ9UEF7 1012 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 CPSF3Q9UKF6 684 aaKnown RBP4.23□□□□□ -1.73
CBX5-203ENST00000547872 ASXL3Q9C0F0 2248 aa4.23□□□□□ -1.73
CBX5-203ENST00000547872 MGAQ8IWI9 3026 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms