RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 F8W8V4 182 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 GOLGA8TH3BQL2 631 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 PRICKLE3O43900 615 aaPredicted RBP12.83□□□□□ -0.36
CPSF6-204ENST00000547486 KDM1AO60341 852 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 VAPBO95292 243 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 ITGAXP20702 1163 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 PPARGP37231 505 aaPredicted RBP12.83□□□□□ -0.36
CPSF6-204ENST00000547486 SSPNQ14714 243 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 CTSL3PQ5NE16 218 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 MRPL14Q6P1L8 145 aaKnown RBP12.83□□□□□ -0.36
CPSF6-204ENST00000547486 TLDC1Q6P9B6 456 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 LRRC8BQ6P9F7 803 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 GSTA5Q7RTV2 222 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 MRGPREQ86SM8 312 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 DCUN1D3Q8IWE4 304 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 PRELID2Q8N945 189 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 TMEM102Q8N9M5 508 aaPredicted RBP12.83□□□□□ -0.36
CPSF6-204ENST00000547486 OR2L8Q8NGY9 312 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 PROKR1Q8TCW9 393 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 COL26A1Q96A83 441 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 BIRC8Q96P09 236 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 TSSK1BQ9BXA7 367 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 MFRPQ9BY79 579 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 IL22Q9GZX6 179 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 LUZP4Q9P127 313 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 IFT80Q9P2H3 777 aaPredicted RBP12.83□□□□□ -0.36
CPSF6-204ENST00000547486 TTC7AQ9ULT0 858 aaPredicted RBP12.83□□□□□ -0.36
CPSF6-204ENST00000547486 RUVBL2Q9Y230 463 aaKnown RBP12.83□□□□□ -0.36
CPSF6-204ENST00000547486 ZKSCAN5Q9Y2L8 839 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 PTRH2Q9Y3E5 179 aaKnown RBP12.83□□□□□ -0.36
CPSF6-204ENST00000547486 PIKFYVEQ9Y2I7 2098 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 TNRC6AQ8NDV7 1962 aaKnown RBP12.83□□□□□ -0.36
CPSF6-204ENST00000547486 MED13Q9UHV7 2174 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 GOLGA6L6A8MZA4 724 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 RASGRF2O14827 1237 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 CEP104O60308 925 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 AVILO75366 819 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 NDUFS3O75489 264 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 SORBS2O94875 1100 aaKnown RBP12.82□□□□□ -0.36
CPSF6-204ENST00000547486 C1orf105O95561 183 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 UMODP07911 640 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 CCDC175P0C221 793 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 ALAS2P22557 587 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 RPS3P23396 243 aaKnown RBP eCLIP12.82□□□□□ -0.36
CPSF6-204ENST00000547486 FMO4P31512 558 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 UQCRFS1P47985 274 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 TERF1P54274 439 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 SF1Q15637 639 aaKnown RBP12.82□□□□□ -0.36
CPSF6-204ENST00000547486 TRIP13Q15645 432 aaPredicted RBP12.82□□□□□ -0.36
CPSF6-204ENST00000547486 NKAIN1Q4KMZ8 207 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 JMJD6Q6NYC1 403 aaPredicted RBP12.82□□□□□ -0.36
CPSF6-204ENST00000547486 FIGLAQ6QHK4 219 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 C4orf22Q6V702 233 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 RAB43Q86YS6 212 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 SPNS2Q8IVW8 549 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 LRRC8AQ8IWT6 810 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 RBMXL3Q8N7X1 1067 aaKnown RBP12.82□□□□□ -0.36
CPSF6-204ENST00000547486 Q8NA96 180 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 OR2Y1Q8NGV0 311 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 CPT1CQ8TCG5 803 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 SMAD5Q99717 465 aaKnown RBP12.82□□□□□ -0.36
CPSF6-204ENST00000547486 TRIM56Q9BRZ2 755 aaKnown RBP12.82□□□□□ -0.36
CPSF6-204ENST00000547486 NDC1Q9BTX1 674 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 IRAK4Q9NWZ3 460 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 BFARQ9NZS9 450 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.82□□□□□ -0.36
CPSF6-204ENST00000547486 GALPQ9UBC7 116 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 GPN3Q9UHW5 284 aaPredicted RBP12.82□□□□□ -0.36
CPSF6-204ENST00000547486 GNPTGQ9UJJ9 305 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 PADI2Q9Y2J8 665 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 ZNF451Q9Y4E5 1061 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 MAP4K5Q9Y4K4 846 aa12.82□□□□□ -0.36
CPSF6-204ENST00000547486 SEC16AO15027 2179 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 S1PR4O95977 384 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 RPN2P04844 631 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 TPSB2P20231 275 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 GNLYP22749 145 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 MCM3P25205 808 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 PSMB5P28074 263 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 FOLR3P41439 243 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 BDKRB1P46663 353 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 EIF3BP55884 814 aaKnown RBP12.81□□□□□ -0.36
CPSF6-204ENST00000547486 YBX1P67809 324 aaKnown RBP12.81□□□□□ -0.36
CPSF6-204ENST00000547486 CCZ1BP86790 482 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 CCZ1P86791 482 aaPredicted RBP12.81□□□□□ -0.36
CPSF6-204ENST00000547486 TMED2Q15363 201 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 TPSAB1Q15661 275 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 PRR30Q53SZ7 412 aaPredicted RBP12.81□□□□□ -0.36
CPSF6-204ENST00000547486 TTLL10Q6ZVT0 673 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 OTOAQ7RTW8 1153 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 PPP1R32Q7Z5V6 425 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 ATCAYQ86WG3 371 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 LRRC6Q86X45 466 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 MPP5Q8N3R9 675 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 FAM26EQ8N5C1 309 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 DENND1AQ8TEH3 1009 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.81□□□□□ -0.36
CPSF6-204ENST00000547486 MAIP1Q8WWC4 291 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 LPGAT1Q92604 370 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 SLC22A18Q96BI1 424 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms