RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 TRIM73Q86UV7 250 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 UNC5BQ8IZJ1 945 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 SPATA4Q8NEY3 305 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 OR1L3Q8NH93 324 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 HMGCLL1Q8TB92 370 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 STARD8Q92502 1023 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 FAM136AQ96C01 138 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 CATSPER2Q96P56 530 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 IL17FQ96PD4 163 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 TRIM31Q9BZY9 425 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 FAM117AQ9C073 453 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 FAM114A2Q9NRY5 505 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 ZC3H7BQ9UGR2 993 aaKnown RBP15.34■□□□□ 0.05
DDX54-204ENST00000546898 SERTAD3Q9UJW9 196 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 CROTQ9UKG9 612 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 MED16Q9Y2X0 877 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 PCDHGA6Q9Y5G7 932 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 TEX264Q9Y6I9 313 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 FER1L5A0AVI2 2057 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 ATMQ13315 3056 aa15.33■□□□□ 0.05
DDX54-204ENST00000546898 VPS26AO75436 327 aa15.33■□□□□ 0.04
DDX54-204ENST00000546898 PSIP1O75475 530 aaKnown RBP15.33■□□□□ 0.04
DDX54-204ENST00000546898 HAUS5O94927 633 aa15.33■□□□□ 0.04
DDX54-204ENST00000546898 CATP04040 527 aaKnown RBP15.33■□□□□ 0.04
DDX54-204ENST00000546898 NTRK1P04629 796 aa15.33■□□□□ 0.04
DDX54-204ENST00000546898 MPC1LP0DKB6 136 aa15.33■□□□□ 0.04
DDX54-204ENST00000546898 CBSLP0DN79 551 aa15.33■□□□□ 0.04
DDX54-204ENST00000546898 CYP2A7P20853 494 aa15.33■□□□□ 0.04
DDX54-204ENST00000546898 CBSP35520 551 aa15.33■□□□□ 0.04
DDX54-204ENST00000546898 ELK3P41970 407 aa15.33■□□□□ 0.04
DDX54-204ENST00000546898 ITGA1P56199 1179 aa15.33■□□□□ 0.04
DDX54-204ENST00000546898 DNASE1L3Q13609 305 aa15.33■□□□□ 0.04
DDX54-204ENST00000546898 FRG1Q14331 258 aaKnown RBP15.33■□□□□ 0.04
DDX54-204ENST00000546898 KLHL38Q2WGJ6 581 aa15.33■□□□□ 0.04
DDX54-204ENST00000546898 ACSBG2Q5FVE4 666 aa15.33■□□□□ 0.04
DDX54-204ENST00000546898 STEAP4Q687X5 459 aa15.33■□□□□ 0.04
DDX54-204ENST00000546898 LRRC8EQ6NSJ5 796 aa15.33■□□□□ 0.04
DDX54-204ENST00000546898 IGDCC3Q8IVU1 814 aa15.33■□□□□ 0.04
DDX54-204ENST00000546898 GIMAP7Q8NHV1 300 aa15.33■□□□□ 0.04
DDX54-204ENST00000546898 N4BP2L2Q92802 583 aaPredicted RBP15.33■□□□□ 0.04
DDX54-204ENST00000546898 INPP5DQ92835 1189 aa15.33■□□□□ 0.04
DDX54-204ENST00000546898 AARSD1Q9BTE6 412 aaKnown RBP15.33■□□□□ 0.04
DDX54-204ENST00000546898 KLHL25Q9H0H3 589 aa15.33■□□□□ 0.04
DDX54-204ENST00000546898 INTS7Q9NVH2 962 aaKnown RBP15.33■□□□□ 0.04
DDX54-204ENST00000546898 GALPQ9UBC7 116 aa15.33■□□□□ 0.04
DDX54-204ENST00000546898 CIDEBQ9UHD4 219 aa15.33■□□□□ 0.04
DDX54-204ENST00000546898 IL17BQ9UHF5 180 aa15.33■□□□□ 0.04
DDX54-204ENST00000546898 CHMP2BQ9UQN3 213 aa15.33■□□□□ 0.04
DDX54-204ENST00000546898 RUVBL2Q9Y230 463 aaKnown RBP15.33■□□□□ 0.04
DDX54-204ENST00000546898 DHRS7Q9Y394 339 aa15.33■□□□□ 0.04
DDX54-204ENST00000546898 E7EQ34 232 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 E7ESA3 106 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 TP73O15350 636 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 F7P08709 466 aaPredicted RBP15.32■□□□□ 0.04
DDX54-204ENST00000546898 HBQ1P09105 142 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 ERVK-10P10266 1014 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 ERGP11308 486 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 TCN2P20062 427 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 OAS2P29728 719 aaKnown RBP15.32■□□□□ 0.04
DDX54-204ENST00000546898 RPL21P46778 160 aaKnown RBP15.32■□□□□ 0.04
DDX54-204ENST00000546898 GABRA4P48169 554 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 CYP4F2P78329 520 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 CDC20Q12834 499 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 CBLBQ13191 982 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 ZIC1Q15915 447 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 CCSMST1Q4G0I0 132 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 UGT3A1Q6NUS8 523 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 GPR135Q8IZ08 494 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 FBXO15Q8NCQ5 510 aaPredicted RBP15.32■□□□□ 0.04
DDX54-204ENST00000546898 CD200R1Q8TD46 325 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 CT55Q8WUE5 264 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 EXTL1Q92935 676 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 RNF31Q96EP0 1072 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 GPR21Q99679 349 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 SLC30A3Q99726 388 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 WDR83Q9BRX9 315 aaKnown RBP15.32■□□□□ 0.04
DDX54-204ENST00000546898 ERP44Q9BS26 406 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 ACTR5Q9H9F9 607 aaPredicted RBP15.32■□□□□ 0.04
DDX54-204ENST00000546898 PLAC1Q9HBJ0 212 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 FAM60AQ9NP50 221 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 WHRNQ9P202 907 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 CORO1CQ9ULV4 474 aaPredicted RBP15.32■□□□□ 0.04
DDX54-204ENST00000546898 SNX24Q9Y343 169 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 HEATR5BQ9P2D3 2071 aa15.32■□□□□ 0.04
DDX54-204ENST00000546898 TLN1Q9Y490 2541 aaKnown RBP15.31■□□□□ 0.04
DDX54-204ENST00000546898 ARHGEF33A8MVX0 844 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 MYO1CO00159 1063 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 PRICKLE3O43900 615 aaPredicted RBP15.31■□□□□ 0.04
DDX54-204ENST00000546898 RECKO95980 971 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 KLK3P07288 261 aaPredicted RBP15.31■□□□□ 0.04
DDX54-204ENST00000546898 MAGP20916 626 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 F8A1P23610 371 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 CARSP49589 748 aaKnown RBP15.31■□□□□ 0.04
DDX54-204ENST00000546898 CALCOCO2Q13137 446 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 GPS2Q13227 327 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 ARHGAP19Q14CB8 494 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 NAA25Q14CX7 972 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 TBR1Q16650 682 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 CYP2A13Q16696 494 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms