RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 PHACTR4Q8IZ21 702 aa11.64□□□□□ -0.55
CCDC38-202ENST00000546386 IL17RCQ8NAC3 791 aa11.64□□□□□ -0.55
CCDC38-202ENST00000546386 UCMAQ8WVF2 138 aa11.64□□□□□ -0.55
CCDC38-202ENST00000546386 NEIL2Q969S2 332 aa11.64□□□□□ -0.55
CCDC38-202ENST00000546386 CCM2Q9BSQ5 444 aa11.64□□□□□ -0.55
CCDC38-202ENST00000546386 SORBS1Q9BX66 1292 aaKnown RBP11.64□□□□□ -0.55
CCDC38-202ENST00000546386 SLC12A9Q9BXP2 914 aa11.64□□□□□ -0.55
CCDC38-202ENST00000546386 SPNS1Q9H2V7 528 aa11.64□□□□□ -0.55
CCDC38-202ENST00000546386 VPS4AQ9UN37 437 aa11.64□□□□□ -0.55
CCDC38-202ENST00000546386 INVSQ9Y283 1065 aa11.64□□□□□ -0.55
CCDC38-202ENST00000546386 WDR37Q9Y2I8 494 aa11.64□□□□□ -0.55
CCDC38-202ENST00000546386 KLHL20Q9Y2M5 609 aa11.64□□□□□ -0.55
CCDC38-202ENST00000546386 C15orf41Q9Y2V0 281 aa11.64□□□□□ -0.55
CCDC38-202ENST00000546386 ABCA7Q8IZY2 2146 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 POM121BA6NF01 834 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 CCDC154A6NI56 674 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 C2CD4DB7Z1M9 353 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 ARNTLO00327 626 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 NME4O00746 187 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 CLDN9O95484 217 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 GRIA3P42263 894 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 ZFP36L2P47974 494 aaKnown RBP11.63□□□□□ -0.55
CCDC38-202ENST00000546386 POLR2JP52435 117 aaKnown RBP11.63□□□□□ -0.55
CCDC38-202ENST00000546386 RAB30Q15771 203 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 PGS1Q32NB8 556 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 SPANXN4Q5MJ08 99 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 C16orf89Q6UX73 402 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 IZUMO2Q6UXV1 221 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 PNPT1Q8TCS8 783 aaKnown RBP11.63□□□□□ -0.55
CCDC38-202ENST00000546386 CSGALNACT1Q8TDX6 532 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 WFIKKN2Q8TEU8 576 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 TRIM54Q9BYV2 358 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 SLC32A1Q9H598 525 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 S100A14Q9HCY8 104 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 SDR39U1Q9NRG7 319 aaPredicted RBP11.63□□□□□ -0.55
CCDC38-202ENST00000546386 PIAS3Q9Y6X2 628 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 A0A0G2JN53 185 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 ZNF839A8K0R7 811 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 MANBAO00462 879 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 IMPA1P29218 277 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 ACSL1P33121 698 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 KIR2DL1P43626 348 aaPredicted RBP11.63□□□□□ -0.55
CCDC38-202ENST00000546386 KCNK10P57789 538 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 PPP1R8Q12972 351 aaKnown RBP11.63□□□□□ -0.55
CCDC38-202ENST00000546386 TRMT5Q32P41 509 aaKnown RBP11.63□□□□□ -0.55
CCDC38-202ENST00000546386 GRAMD1BQ3KR37 738 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 XKR7Q5GH72 579 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 Q7L0L9 218 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 THOC6Q86W42 341 aaKnown RBP11.63□□□□□ -0.55
CCDC38-202ENST00000546386 PGAM4Q8N0Y7 254 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 FAM160A2Q8N612 972 aaPredicted RBP11.63□□□□□ -0.55
CCDC38-202ENST00000546386 RPLP0P6Q8NHW5 317 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 RLN3Q8WXF3 142 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 STOX2Q9P2F5 926 aaPredicted RBP11.63□□□□□ -0.55
CCDC38-202ENST00000546386 CROTQ9UKG9 612 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 TNPO3Q9Y5L0 923 aaKnown RBP11.63□□□□□ -0.55
CCDC38-202ENST00000546386 ST14Q9Y5Y6 855 aa11.63□□□□□ -0.55
CCDC38-202ENST00000546386 TICRRQ7Z2Z1 1910 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 A0A1W2PQU0 124 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 IFRD1O00458 451 aaPredicted RBP11.62□□□□□ -0.55
CCDC38-202ENST00000546386 TGFB1P01137 390 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 FTH1P02794 183 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 HOXB2P14652 356 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 ME2P23368 584 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 STX5Q13190 355 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 DOC2AQ14183 400 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 RTL10Q7L3V2 364 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 CYP2U1Q7Z449 544 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 GALNT10Q86SR1 603 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 KIAA2013Q8IYS2 634 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 LILRA2Q8N149 483 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 C10orf111Q8N326 155 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 PGBD3Q8N328 593 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 CCL4L1Q8NHW4 92 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 ZNF480Q8WV37 535 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 PPP1R16AQ96I34 528 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 SLC25A23Q9BV35 468 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 MMADHCQ9H3L0 296 aaPredicted RBP11.62□□□□□ -0.55
CCDC38-202ENST00000546386 KCNK12Q9HB15 430 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 IMP3Q9NV31 184 aaKnown RBP11.62□□□□□ -0.55
CCDC38-202ENST00000546386 CMTM6Q9NX76 183 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 DKK3Q9UBP4 350 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 PCDHGB4Q9UN71 923 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 PCDHGB5Q9Y5G0 923 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 DGKBQ9Y6T7 804 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 SCN2AQ99250 2005 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 FEZF1A0PJY2 475 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 C1QTNF3-AMACRE9PGA6 284 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 H3BNX3 289 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 GFYI3L273 518 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 FXYD1O00168 92 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 SLCO2B1O94956 709 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 CYP2A7P20853 494 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 CTHP32929 405 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 CLCNKAP51800 687 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 ERVK-8P63133 956 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 CKAP5Q14008 2032 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 NRF1Q16656 503 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 PNCKQ6P2M8 343 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 BLOC1S3Q6QNY0 202 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms