RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 GLT6D1Q7Z4J2 308 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 SNX20Q7Z614 316 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 SYT9Q86SS6 491 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 SERINC5Q86VE9 423 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 IGFN1Q86VF2 1251 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 TSPYL5Q86VY4 417 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-225ENST00000545920 IFNEQ86WN2 208 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 ZC3H7AQ8IWR0 971 aaKnown RBP6.33□□□□□ -1.4
SNHG1-225ENST00000545920 SULF2Q8IWU5 870 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 OFCC1Q8IZS5 231 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 TMEM132CQ8N3T6 1108 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 RYBPQ8N488 228 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-225ENST00000545920 SLC15A4Q8N697 577 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 TMCO5AQ8N6Q1 288 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 OR7A2PQ8NGA2 310 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 OR10T2Q8NGX3 314 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 SCAMP5Q8TAC9 235 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 METTL6Q8TCB7 284 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 CD200R1Q8TD46 325 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 TTC9Q92623 222 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 GTF2H4Q92759 462 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 TANKQ92844 425 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 PSMG2Q969U7 264 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 TESCQ96BS2 214 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 ITCHQ96J02 903 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 NSMCE3Q96MG7 304 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 ZNF583Q96ND8 569 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 RPRD1AQ96P16 312 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-225ENST00000545920 SEPHS2Q99611 448 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 GPR21Q99679 349 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 NEURL2Q9BR09 285 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 C17orf80Q9BSJ5 609 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 CINPQ9BW66 212 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-225ENST00000545920 FUNDC2Q9BWH2 189 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 EMILIN2Q9BXX0 1053 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 DPY30Q9C005 99 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 PDGFDQ9GZP0 370 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-225ENST00000545920 KCNH6Q9H252 994 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 ADNPQ9H2P0 1102 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 IGFLR1Q9H665 355 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 CLMPQ9H6B4 373 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 SPC25Q9HBM1 224 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 TM9SF3Q9HD45 589 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 SEMA4BQ9NPR2 832 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-225ENST00000545920 TLR9Q9NR96 1032 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.33□□□□□ -1.4
SNHG1-225ENST00000545920 SELENONQ9NZV5 590 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 MPP6Q9NZW5 540 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 MARCH2Q9P0N8 246 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 UBA2Q9UBT2 640 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-225ENST00000545920 WARS2Q9UGM6 360 aaKnown RBP6.33□□□□□ -1.4
SNHG1-225ENST00000545920 SFMBT1Q9UHJ3 866 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 ADGRE2Q9UHX3 823 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 ENOPH1Q9UHY7 261 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 RPS6KA6Q9UK32 745 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 CORO2BQ9UQ03 480 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 MED16Q9Y2X0 877 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 OARD1Q9Y530 152 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 CPQQ9Y646 472 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 PATJQ8NI35 1801 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 PLXNB2O15031 1838 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 TRBV5-3A0A0A0MS03 114 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 C1orf232A0A0U1RR37 186 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 NPEPPSL1A6NEC2 478 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 CASTOR2A6NHX0 329 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 ADARB2-AS1A8MUL3 147 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 E5RI56 91 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 BCKDKO14874 412 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 PER2O15055 1255 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 STX7O15400 261 aaKnown RBP6.32□□□□□ -1.4
SNHG1-225ENST00000545920 MSI1O43347 362 aaKnown RBP6.32□□□□□ -1.4
SNHG1-225ENST00000545920 JRKO75564 520 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 RSL1D1O76021 490 aaKnown RBP6.32□□□□□ -1.4
SNHG1-225ENST00000545920 SNX4O95219 450 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 MOCS2O96007 188 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-225ENST00000545920 MT-CO1P00395 513 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 KRT6AP02538 564 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 FUCA1P04066 466 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 KRT6BP04259 564 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 ZDHHC11BP0C7U3 371 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 AKR1A1P14550 325 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 ZNF7P17097 686 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-225ENST00000545920 CR2P20023 1033 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 CHRM3P20309 590 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 EFNA1P20827 205 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-225ENST00000545920 TACR2P21452 398 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 FPR1P21462 350 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 PCMT1P22061 227 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 S100A1P23297 94 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 DGKAP23743 735 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 NFKBIAP25963 317 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 FMO4P31512 558 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 SHMT2P34897 504 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 DCTP40126 519 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 KRT6CP48668 564 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 PXNP49023 591 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-225ENST00000545920 SLC11A2P49281 568 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 ZNF157P51786 506 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-225ENST00000545920 PPP5CP53041 499 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 PGGT1BP53609 377 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms