RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 SPDYE1Q8NFV5 336 aaPredicted RBP19.27■□□□□ 0.68
COPS7A-218ENST00000543939 ZNF480Q8WV37 535 aa19.27■□□□□ 0.68
COPS7A-218ENST00000543939 PPP3R2Q96LZ3 170 aa19.27■□□□□ 0.68
COPS7A-218ENST00000543939 OR4K3Q96R72 315 aa19.27■□□□□ 0.68
COPS7A-218ENST00000543939 NPAS2Q99743 824 aa19.27■□□□□ 0.68
COPS7A-218ENST00000543939 RMI1Q9H9A7 625 aa19.27■□□□□ 0.68
COPS7A-218ENST00000543939 SLC7A8Q9UHI5 535 aa19.27■□□□□ 0.68
COPS7A-218ENST00000543939 RGS14O43566 566 aa19.26■□□□□ 0.67
COPS7A-218ENST00000543939 UGDHO60701 494 aa19.26■□□□□ 0.67
COPS7A-218ENST00000543939 NME5P56597 212 aa19.26■□□□□ 0.67
COPS7A-218ENST00000543939 DMPKQ09013 629 aa19.26■□□□□ 0.67
COPS7A-218ENST00000543939 TBL3Q12788 808 aaKnown RBP19.26■□□□□ 0.67
COPS7A-218ENST00000543939 CHIT1Q13231 466 aa19.26■□□□□ 0.67
COPS7A-218ENST00000543939 SNCBQ16143 134 aa19.26■□□□□ 0.67
COPS7A-218ENST00000543939 SMU1Q2TAY7 513 aa19.26■□□□□ 0.67
COPS7A-218ENST00000543939 AP5B1Q2VPB7 878 aa19.26■□□□□ 0.67
COPS7A-218ENST00000543939 PDCD4Q53EL6 469 aaKnown RBP19.26■□□□□ 0.67
COPS7A-218ENST00000543939 PTCRAQ6ISU1 281 aaPredicted RBP19.26■□□□□ 0.67
COPS7A-218ENST00000543939 PPFIBP2Q8ND30 876 aa19.26■□□□□ 0.67
COPS7A-218ENST00000543939 WDR60Q8WVS4 1066 aa19.26■□□□□ 0.67
COPS7A-218ENST00000543939 MED8Q96G25 268 aa19.26■□□□□ 0.67
COPS7A-218ENST00000543939 UHRF1Q96T88 793 aaPredicted RBP19.26■□□□□ 0.67
COPS7A-218ENST00000543939 C1orf50Q9BV19 199 aa19.26■□□□□ 0.67
COPS7A-218ENST00000543939 MRPL1Q9BYD6 325 aaKnown RBP19.26■□□□□ 0.67
COPS7A-218ENST00000543939 NDE1Q9NXR1 346 aa19.26■□□□□ 0.67
COPS7A-218ENST00000543939 SNX6Q9UNH7 406 aa19.26■□□□□ 0.67
COPS7A-218ENST00000543939 CHRNB1P11230 501 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 JUPP14923 745 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 HALP42357 657 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 ART3Q13508 389 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 SGO1Q5FBB7 561 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 LIPJQ5W064 366 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 REP15Q6BDI9 236 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 Q6ZS52 159 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 PGAM4Q8N0Y7 254 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 ZNF687Q8N1G0 1237 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 DENND6BQ8NEG7 585 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 OR2T34Q8NGX1 318 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 MAGEC3Q8TD91 643 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 TIMM29Q9BSF4 260 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 ITM2CQ9NQX7 267 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 DUSP12Q9UNI6 340 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 ASF1AQ9Y294 204 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 NRP2O60462 931 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 PDYNP01213 254 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 HOXC4P09017 264 aaPredicted RBP19.25■□□□□ 0.67
COPS7A-218ENST00000543939 IRF8Q02556 426 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 LRP8Q14114 963 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 KPNB1Q14974 876 aaKnown RBP19.25■□□□□ 0.67
COPS7A-218ENST00000543939 ZNF852Q6ZMS4 543 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 Q7L0L9 218 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 NET1Q7Z628 596 aaPredicted RBP19.25■□□□□ 0.67
COPS7A-218ENST00000543939 RGL4Q8IZJ4 473 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 HMGB4Q8WW32 186 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 TFGQ92734 400 aaPredicted RBP19.25■□□□□ 0.67
COPS7A-218ENST00000543939 MYOCQ99972 504 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 BTBD1Q9H0C5 482 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 WDR41Q9HAD4 459 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 TMEM45AQ9NWC5 275 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 USP36Q9P275 1121 aaKnown RBP19.25■□□□□ 0.67
COPS7A-218ENST00000543939 EBF1Q9UH73 591 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 ACSL5Q9ULC5 683 aa19.25■□□□□ 0.67
COPS7A-218ENST00000543939 PRPF19Q9UMS4 504 aaKnown RBP19.25■□□□□ 0.67
COPS7A-218ENST00000543939 SERTM1A2A2V5 107 aa19.24■□□□□ 0.67
COPS7A-218ENST00000543939 LRRC72A6NJI9 287 aa19.24■□□□□ 0.67
COPS7A-218ENST00000543939 C10orf142B7Z368 130 aa19.24■□□□□ 0.67
COPS7A-218ENST00000543939 CACNB4O00305 520 aaPredicted RBP19.24■□□□□ 0.67
COPS7A-218ENST00000543939 ENTPD5O75356 428 aa19.24■□□□□ 0.67
COPS7A-218ENST00000543939 CIB2O75838 187 aa19.24■□□□□ 0.67
COPS7A-218ENST00000543939 CD22P20273 847 aa19.24■□□□□ 0.67
COPS7A-218ENST00000543939 HMGCS1Q01581 520 aa19.24■□□□□ 0.67
COPS7A-218ENST00000543939 MMEL1Q495T6 779 aa19.24■□□□□ 0.67
COPS7A-218ENST00000543939 RFTN2Q52LD8 501 aaPredicted RBP19.24■□□□□ 0.67
COPS7A-218ENST00000543939 PYCR3Q53H96 274 aa19.24■□□□□ 0.67
COPS7A-218ENST00000543939 BLOC1S3Q6QNY0 202 aa19.24■□□□□ 0.67
COPS7A-218ENST00000543939 CHST15Q7LFX5 561 aaPredicted RBP19.24■□□□□ 0.67
COPS7A-218ENST00000543939 LRRC56Q8IYG6 542 aaPredicted RBP19.24■□□□□ 0.67
COPS7A-218ENST00000543939 SYTL1Q8IYJ3 562 aa19.24■□□□□ 0.67
COPS7A-218ENST00000543939 OR5AR1Q8NGP9 310 aa19.24■□□□□ 0.67
COPS7A-218ENST00000543939 TSPEARQ8WU66 669 aa19.24■□□□□ 0.67
COPS7A-218ENST00000543939 SELENOMQ8WWX9 145 aa19.24■□□□□ 0.67
COPS7A-218ENST00000543939 SCARF2Q96GP6 870 aaPredicted RBP19.24■□□□□ 0.67
COPS7A-218ENST00000543939 SGPP1Q9BX95 441 aa19.24■□□□□ 0.67
COPS7A-218ENST00000543939 ELOVL6Q9H5J4 265 aa19.24■□□□□ 0.67
COPS7A-218ENST00000543939 SGK2Q9HBY8 427 aa19.24■□□□□ 0.67
COPS7A-218ENST00000543939 SLC52A3Q9NQ40 469 aa19.24■□□□□ 0.67
COPS7A-218ENST00000543939 GPRC5BQ9NZH0 403 aa19.24■□□□□ 0.67
COPS7A-218ENST00000543939 ZIM2Q9NZV7 527 aa19.24■□□□□ 0.67
COPS7A-218ENST00000543939 PSMD13Q9UNM6 376 aa19.24■□□□□ 0.67
COPS7A-218ENST00000543939 POM121BA6NF01 834 aa19.23■□□□□ 0.67
COPS7A-218ENST00000543939 PRR19A6NJB7 356 aa19.23■□□□□ 0.67
COPS7A-218ENST00000543939 BBIP1A8MTZ0 92 aa19.23■□□□□ 0.67
COPS7A-218ENST00000543939 E7EQ34 232 aa19.23■□□□□ 0.67
COPS7A-218ENST00000543939 NR5A2O00482 541 aa19.23■□□□□ 0.67
COPS7A-218ENST00000543939 ACP5P13686 325 aa19.23■□□□□ 0.67
COPS7A-218ENST00000543939 FOSL2P15408 326 aa19.23■□□□□ 0.67
COPS7A-218ENST00000543939 GNPDA1P46926 289 aa19.23■□□□□ 0.67
COPS7A-218ENST00000543939 ZFP36L2P47974 494 aaKnown RBP19.23■□□□□ 0.67
COPS7A-218ENST00000543939 MTTPP55157 894 aa19.23■□□□□ 0.67
COPS7A-218ENST00000543939 KIAA1024LP59773 190 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms