RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 ZBTB2Q8N680 514 aa15.05■□□□□ -0
VPS33A-206ENST00000542310 GSDMBQ8TAX9 411 aa15.05■□□□□ -0
VPS33A-206ENST00000542310 LZTFL1Q9NQ48 299 aa15.05■□□□□ -0
VPS33A-206ENST00000542310 TXLNGQ9NUQ3 528 aa15.05■□□□□ -0
VPS33A-206ENST00000542310 NDOR1Q9UHB4 597 aa15.05■□□□□ -0
VPS33A-206ENST00000542310 GPN3Q9UHW5 284 aaPredicted RBP15.05■□□□□ -0
VPS33A-206ENST00000542310 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.04■□□□□ -0
VPS33A-206ENST00000542310 IQCF5A8MTL0 148 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 H3BMM5 538 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 PFDN6O15212 129 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 HCRTR1O43613 425 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 DPM1O60762 260 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 NDUFS3O75489 264 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 KLF7O75840 302 aaPredicted RBP15.04■□□□□ -0
VPS33A-206ENST00000542310 SORBS2O94875 1100 aaKnown RBP15.04■□□□□ -0
VPS33A-206ENST00000542310 MAGP20916 626 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 ATP5DP30049 168 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 FOLR3P41439 243 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 MAGEA6P43360 314 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 GCGRP47871 477 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 CCL11P51671 97 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 ADARP55265 1226 aaKnown RBP15.04■□□□□ -0
VPS33A-206ENST00000542310 CRADDP78560 199 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 ATP1A4Q13733 1029 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 SSPNQ14714 243 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 IGFBP7Q16270 282 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 YOD1Q5VVQ6 348 aaPredicted RBP15.04■□□□□ -0
VPS33A-206ENST00000542310 MRNIPQ6NTE8 343 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 TTC23LQ6PF05 361 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 OTOAQ7RTW8 1153 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 LDB1Q86U70 411 aaPredicted RBP15.04■□□□□ -0
VPS33A-206ENST00000542310 KRT222Q8N1A0 295 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 RAB42Q8N4Z0 105 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 OR2Y1Q8NGV0 311 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 HMGCLL1Q8TB92 370 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 FKBP10Q96AY3 582 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 RAD51AP1Q96B01 352 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 NDC1Q9BTX1 674 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 EURLQ9NYK6 297 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 GPR83Q9NYM4 423 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 SOX13Q9UN79 622 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 PLAAQ9Y263 795 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 SHANK1Q9Y566 2161 aa15.04■□□□□ -0
VPS33A-206ENST00000542310 COL12A1Q99715 3063 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 NRDCO43847 1150 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 KLHL41O60662 606 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 CBSLP0DN79 551 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 OGNP20774 298 aaKnown RBP15.03■□□□□ -0
VPS33A-206ENST00000542310 ARNTP27540 789 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 NMBRP28336 390 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 CBSP35520 551 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 CCNFP41002 786 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 ARSFP54793 590 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 SARNPP82979 210 aaKnown RBP15.03■□□□□ -0
VPS33A-206ENST00000542310 UBAP2LQ14157 1087 aaKnown RBP15.03■□□□□ -0
VPS33A-206ENST00000542310 GBX1Q14549 363 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 NAA25Q14CX7 972 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 ZC3H12BQ5HYM0 836 aaKnown RBP15.03■□□□□ -0
VPS33A-206ENST00000542310 COLEC12Q5KU26 742 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 KIAA0930Q6ICG6 404 aaPredicted RBP15.03■□□□□ -0
VPS33A-206ENST00000542310 MRPL14Q6P1L8 145 aaKnown RBP15.03■□□□□ -0
VPS33A-206ENST00000542310 LRRC8AQ8IWT6 810 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 ZNF655Q8N720 491 aaPredicted RBP15.03■□□□□ -0
VPS33A-206ENST00000542310 FDCSPQ8NFU4 85 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 MAGEC3Q8TD91 643 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 NACC2Q96BF6 587 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 FER1L6-AS2Q96M78 137 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 FOPNLQ96NB1 174 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 TCF12Q99081 682 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 SMAD5Q99717 465 aaKnown RBP15.03■□□□□ -0
VPS33A-206ENST00000542310 SPRTNQ9H040 489 aaPredicted RBP15.03■□□□□ -0
VPS33A-206ENST00000542310 IRAK4Q9NWZ3 460 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 SYBUQ9NX95 663 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 SPATA7Q9P0W8 599 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 IFT80Q9P2H3 777 aaPredicted RBP15.03■□□□□ -0
VPS33A-206ENST00000542310 SLC39A10Q9ULF5 831 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 KLK4Q9Y5K2 254 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 LRRK2Q5S007 2527 aa15.03■□□□□ -0
VPS33A-206ENST00000542310 A0A1B0GX78 115 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 CEP104O60308 925 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 C1orf105O95561 183 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 ONECUT2O95948 504 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 ESR1P03372 595 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 PAMP19021 973 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 MGAT1P26572 445 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 MLLT10P55197 1068 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 EIF3BP55884 814 aaKnown RBP15.02■□□□□ -0
VPS33A-206ENST00000542310 CCZ1BP86790 482 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 CCZ1P86791 482 aaPredicted RBP15.02■□□□□ -0
VPS33A-206ENST00000542310 KCNJ11Q14654 390 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 NKAIN1Q4KMZ8 207 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 TCTE1Q5JU00 501 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 CTSL3PQ5NE16 218 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 VWA5B1Q5TIE3 1220 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 C1orf189Q5VU69 101 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 FAM69BQ5VUD6 431 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 SDCCAG8Q86SQ7 713 aaPredicted RBP15.02■□□□□ -0
VPS33A-206ENST00000542310 OTUD6BQ8N6M0 293 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 EFCAB3Q8N7B9 438 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 PRELID2Q8N945 189 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms