RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ASCL1P50553 236 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 CTSCP53634 463 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 SELENOVP59797 346 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 EGR4Q05215 589 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 LTBQ06643 244 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 SPOCK1Q08629 439 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 RPA4Q13156 261 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 DECR1Q16698 335 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 UGCGQ16739 394 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 ZNF585BQ52M93 769 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 KRTCAP3Q53RY4 240 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 RNASEH2BQ5TBB1 312 aaKnown RBP4.07□□□□□ -1.76
SNHG1-217ENST00000541578 RAB12Q6IQ22 244 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 RGMBQ6NW40 437 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 ABI3BPQ7Z7G0 1075 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 ERC1Q8IUD2 1116 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 ZNF595Q8IYB9 648 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 BEST3Q8N1M1 668 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 AADATQ8N5Z0 425 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 GCSAMQ8N6F7 178 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 PRR26Q8N8Z3 221 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 PAPD5Q8NDF8 572 aaKnown RBP4.07□□□□□ -1.76
SNHG1-217ENST00000541578 C9orf43Q8TAL5 461 aaPredicted RBP4.07□□□□□ -1.76
SNHG1-217ENST00000541578 ZFAND2BQ8WV99 257 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 UBLCP1Q8WVY7 318 aaPredicted RBP4.07□□□□□ -1.76
SNHG1-217ENST00000541578 DNASE1L2Q92874 299 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 NEUROG1Q92886 237 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 MOB3AQ96BX8 217 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 QRFPRQ96P65 431 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 PARK7Q99497 189 aaKnown RBP4.07□□□□□ -1.76
SNHG1-217ENST00000541578 MTERF1Q99551 399 aaKnown RBP4.07□□□□□ -1.76
SNHG1-217ENST00000541578 DCLK3Q9C098 648 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 PPIL3Q9H2H8 161 aaKnown RBP4.07□□□□□ -1.76
SNHG1-217ENST00000541578 CLK4Q9HAZ1 481 aaKnown RBP4.07□□□□□ -1.76
SNHG1-217ENST00000541578 HHATLQ9HCP6 504 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 PRMT7Q9NVM4 692 aaPredicted RBP4.07□□□□□ -1.76
SNHG1-217ENST00000541578 TMEM161AQ9NX61 479 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 TRPC4Q9UBN4 977 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 WNT16Q9UBV4 365 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 HOOK1Q9UJC3 728 aaKnown RBP4.07□□□□□ -1.76
SNHG1-217ENST00000541578 MYO6Q9UM54 1294 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 PADI2Q9Y2J8 665 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 NFS1Q9Y697 457 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 SHANK3Q9BYB0 1731 aa4.07□□□□□ -1.76
SNHG1-217ENST00000541578 GOLGB1Q14789 3259 aaKnown RBP4.06□□□□□ -1.76
SNHG1-217ENST00000541578 ATP10DQ9P241 1426 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 ACEP12821 1306 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 A0A087WV48 116 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 A0A1B0GVT2 93 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 SYCE3A1L190 88 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 GOLGA6L9A6NEM1 432 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 C4orf47A7E2U8 309 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 RTCAO00442 366 aaKnown RBP4.06□□□□□ -1.76
SNHG1-217ENST00000541578 PLK4O00444 970 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 TIMM23O14925 209 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 ANKRD28O15084 1053 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 PGRMC2O15173 223 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 EIF3DO15371 548 aaKnown RBP eCLIP4.06□□□□□ -1.76
SNHG1-217ENST00000541578 SPRY3O43610 288 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 LDB2O43679 373 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 ZBTB14O43829 449 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 CREG1O75629 220 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 CH25HO95992 272 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 RAB40ALP0C0E4 278 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 ADRA2CP18825 462 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 GNAZP19086 355 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 PTPN3P26045 913 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 TNFRSF8P28908 595 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 C21orf33P30042 268 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-217ENST00000541578 HOXD3P31249 432 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-217ENST00000541578 CTNNB1P35222 781 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 WNT5AP41221 380 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 CLCNKAP51800 687 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 NAGLUP54802 743 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 HNRNPH2P55795 449 aaKnown RBP4.06□□□□□ -1.76
SNHG1-217ENST00000541578 ST8SIA6P61647 398 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 ACTN3Q08043 901 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-217ENST00000541578 GAGE2BQ13066 116 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 GPS2Q13227 327 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 CTTNQ14247 550 aaKnown RBP4.06□□□□□ -1.76
SNHG1-217ENST00000541578 SYT16Q17RD7 645 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 ZNF284Q2VY69 593 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 FUT11Q495W5 492 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 GAGE2EQ4V326 116 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 TCTE1Q5JU00 501 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 SPOUT1Q5T280 376 aaKnown RBP4.06□□□□□ -1.76
SNHG1-217ENST00000541578 ETFRF1Q6IPR1 90 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 GAGE2AQ6NT46 116 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 WDR73Q6P4I2 378 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 SPATA2LQ8IUW3 424 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-217ENST00000541578 PEX5LQ8IYB4 626 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 SPATA20Q8TB22 786 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 GRAPLQ8TC17 118 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-217ENST00000541578 MAGEC3Q8TD91 643 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 HEXDCQ8WVB3 486 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 RSPH1Q8WYR4 309 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 OTUB1Q96FW1 271 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-217ENST00000541578 HNRNPABQ99729 332 aaKnown RBP4.06□□□□□ -1.76
SNHG1-217ENST00000541578 OLFM1Q99784 485 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 CMKLR1Q99788 373 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms