RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 MVB12BQ9H7P6 319 aa9.07□□□□□ -0.96
DDX55-208ENST00000541259 RDH14Q9HBH5 336 aa9.07□□□□□ -0.96
DDX55-208ENST00000541259 SLC40A1Q9NP59 571 aa9.07□□□□□ -0.96
DDX55-208ENST00000541259 ARL15Q9NXU5 204 aa9.07□□□□□ -0.96
DDX55-208ENST00000541259 COPG2Q9UBF2 871 aa9.07□□□□□ -0.96
DDX55-208ENST00000541259 BTBD3Q9Y2F9 522 aa9.07□□□□□ -0.96
DDX55-208ENST00000541259 ASB1Q9Y576 335 aa9.07□□□□□ -0.96
DDX55-208ENST00000541259 MDC1Q14676 2089 aaKnown RBP9.07□□□□□ -0.96
DDX55-208ENST00000541259 FAM186AA6NE01 2351 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 LY6G6EA0A0G2JKS1 128 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 KIR2DS5A0A0G2JLQ3 304 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 A0A0G2JNG1 304 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 OR5K4A6NMS3 321 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 SYCE1LA8MT33 242 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 KIR2DS3K7RE56 304 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 MYO1CO00159 1063 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 YKT6O15498 198 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 SIGLEC6O43699 453 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 KLK8O60259 260 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 PCDHGA12O60330 932 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 SIX3O95343 332 aaPredicted RBP9.06□□□□□ -0.96
DDX55-208ENST00000541259 SLC16A8O95907 504 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 VIPP01282 170 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 BPGMP07738 259 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 ANXA5P08758 320 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 HIST1H2AGP0C0S8 130 aaPredicted RBP9.06□□□□□ -0.96
DDX55-208ENST00000541259 MYL2P10916 166 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 GFAPP14136 432 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 SLC2A4P14672 509 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 HIST1H2ADP20671 130 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 ATP5F1P24539 256 aaPredicted RBP9.06□□□□□ -0.96
DDX55-208ENST00000541259 IMPA1P29218 277 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 MAPK9P45984 424 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 SERPINB4P48594 390 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 GYS2P54840 703 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 FASTKQ14296 549 aaKnown RBP9.06□□□□□ -0.96
DDX55-208ENST00000541259 GPR18Q14330 331 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 KIR2DS5Q14953 304 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 CSRP2Q16527 193 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 C14orf28Q4W4Y0 310 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.06□□□□□ -0.96
DDX55-208ENST00000541259 CES4AQ5XG92 561 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 TTC23LQ6PF05 361 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 RPS27LQ71UM5 84 aaKnown RBP9.06□□□□□ -0.96
DDX55-208ENST00000541259 SLC9B2Q86UD5 537 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 DCUN1D3Q8IWE4 304 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 FBXO39Q8N4B4 442 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 PTGR2Q8N8N7 351 aaPredicted RBP9.06□□□□□ -0.96
DDX55-208ENST00000541259 OR4C6Q8NH72 309 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 MAPK15Q8TD08 544 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 ZNF480Q8WV37 535 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 RAD51AP1Q96B01 352 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 FBXL8Q96CD0 374 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 HIST1H2AHQ96KK5 128 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 CCDC138Q96M89 665 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 HIST1H2AJQ99878 128 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 EGFL8Q99944 293 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 TMEM79Q9BSE2 394 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 H2AFJQ9BTM1 129 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 TBC1D10AQ9BXI6 508 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 TRIM54Q9BYV2 358 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 ATG10Q9H0Y0 220 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 KIR3DX1Q9H7L2 352 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 DNAAF2Q9NVR5 837 aaKnown RBP9.06□□□□□ -0.96
DDX55-208ENST00000541259 OXSMQ9NWU1 459 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 NKIRAS1Q9NYS0 192 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 NLGN3Q9NZ94 848 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 NUDT4Q9NZJ9 180 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 NCKIPSDQ9NZQ3 722 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 STOX2Q9P2F5 926 aaPredicted RBP9.06□□□□□ -0.96
DDX55-208ENST00000541259 POLG2Q9UHN1 485 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 PTBP2Q9UKA9 531 aaKnown RBP9.06□□□□□ -0.96
DDX55-208ENST00000541259 ICKQ9UPZ9 632 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 HEBP2Q9Y5Z4 205 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 RNF215Q9Y6U7 377 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 COLEC10Q9Y6Z7 277 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 U3KQA8 63 aa9.06□□□□□ -0.96
DDX55-208ENST00000541259 ZNF292O60281 2723 aa9.05□□□□□ -0.96
DDX55-208ENST00000541259 CCDC189A1A4V9 331 aa9.05□□□□□ -0.96
DDX55-208ENST00000541259 PROB1E7EW31 1015 aa9.05□□□□□ -0.96
DDX55-208ENST00000541259 CASC3O15234 703 aaKnown RBP9.05□□□□□ -0.96
DDX55-208ENST00000541259 GDF9O60383 454 aa9.05□□□□□ -0.96
DDX55-208ENST00000541259 SMIM24O75264 130 aa9.05□□□□□ -0.96
DDX55-208ENST00000541259 IPO13O94829 963 aaKnown RBP9.05□□□□□ -0.96
DDX55-208ENST00000541259 S100BP04271 92 aaPredicted RBP9.05□□□□□ -0.96
DDX55-208ENST00000541259 RPN2P04844 631 aa9.05□□□□□ -0.96
DDX55-208ENST00000541259 ZNF883P0CG24 379 aa9.05□□□□□ -0.96
DDX55-208ENST00000541259 FGF3P11487 239 aaPredicted RBP9.05□□□□□ -0.96
DDX55-208ENST00000541259 CD59P13987 128 aa9.05□□□□□ -0.96
DDX55-208ENST00000541259 TAC1P20366 129 aa9.05□□□□□ -0.96
DDX55-208ENST00000541259 GDF5P43026 501 aa9.05□□□□□ -0.96
DDX55-208ENST00000541259 HSPA7P48741 367 aa9.05□□□□□ -0.96
DDX55-208ENST00000541259 PRKAA2P54646 552 aa9.05□□□□□ -0.96
DDX55-208ENST00000541259 AP1S2P56377 157 aa9.05□□□□□ -0.96
DDX55-208ENST00000541259 CDKL1Q00532 357 aa9.05□□□□□ -0.96
DDX55-208ENST00000541259 HHEXQ03014 270 aa9.05□□□□□ -0.96
DDX55-208ENST00000541259 NAE1Q13564 534 aa9.05□□□□□ -0.96
DDX55-208ENST00000541259 SULT1C3Q6IMI6 304 aa9.05□□□□□ -0.96
DDX55-208ENST00000541259 AGTRAPQ6RW13 159 aa9.05□□□□□ -0.96
DDX55-208ENST00000541259 DBX2Q6ZNG2 339 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms