RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 BCKDHAP12694 445 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 RPL17P18621 184 aaKnown RBP10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 ITIH1P19827 911 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 TCEA1P23193 301 aaKnown RBP10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 AKT1P31749 480 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 TAF1AQ15573 450 aaPredicted RBP10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 CTXN3Q4LDR2 81 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 LRRC73Q5JTD7 316 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 FAM171A1Q5VUB5 890 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 SPRYD7Q5W111 196 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 GPR153Q6NV75 609 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 TRIM62Q9BVG3 475 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 GPR62Q9BZJ7 368 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 NACA2Q9H009 215 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 GORASP2Q9H8Y8 452 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 LATS2Q9NRM7 1088 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 PDP1Q9P0J1 537 aaPredicted RBP10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 SLC6A14Q9UN76 642 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 A0A0U1RQF3 1178 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 LOC100506127A0A0U1RQW1 187 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 ARNTLO00327 626 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 PGLSO95336 258 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 KLKB1P03952 638 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 NUDT7P0C024 238 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 PABPC1P11940 636 aaKnown RBP10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 COL6A1P12109 1028 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 CD36P16671 472 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 HTR7P34969 479 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 LIPAP38571 399 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 RUNDC3AQ59EK9 446 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 CPZQ66K79 652 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 OR4F3Q6IEY1 312 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 ZCCHC8Q6NZY4 707 aaKnown RBP10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 PLEKHG7Q6ZR37 379 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 CACTIN-AS1Q8N1I8 211 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 OR5K1Q8NHB7 308 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 DYNC2LI1Q8TCX1 351 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 TPD52L3Q96J77 140 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 CNDP2Q96KP4 475 aaKnown RBP10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 TSPAN18Q96SJ8 248 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 ZBTB18Q99592 522 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 C1QTNF3Q9BXJ4 246 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 SERHLQ9NQF3 203 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 WDR37Q9Y2I8 494 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 GMPPBQ9Y5P6 360 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 GPC6Q9Y625 555 aaPredicted RBP10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 TRPM7Q96QT4 1865 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 VWA8A3KMH1 1905 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 DRGXA6NNA5 263 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 BNIP3LO60238 219 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 SLC25A14O95258 325 aaPredicted RBP10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 CD40LGP29965 261 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 HOXA9P31269 272 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 FAM110CQ1W6H9 321 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 ZXDCQ2QGD7 858 aaPredicted RBP10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 CLLU1OSQ5K130 101 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 RTN4RL1Q86UN2 441 aaPredicted RBP10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 OR8J3Q8NGG0 315 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 OR6Q1Q8NGQ2 317 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 SKA2Q8WVK7 121 aaPredicted RBP10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 MAL2Q969L2 176 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 KCNC2Q96PR1 638 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 PSKH2Q96QS6 385 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 ZNF300Q96RE9 604 aaPredicted RBP10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 ACPTQ9BZG2 426 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 ROGDIQ9GZN7 287 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 SLIRPQ9GZT3 109 aaKnown RBP10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 LRTM1Q9HBL6 345 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 PRM3Q9NNZ6 103 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 PALMDQ9NP74 551 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 C8orf4Q9NR00 106 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 QPCTLQ9NXS2 382 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 ARIH1Q9Y4X5 557 aaPredicted RBP10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 PCDHGA12O60330 932 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 ULK1O75385 1050 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 VNN2O95498 520 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 MZF1P28698 734 aaPredicted RBP10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 SLC35A2P78381 396 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 GRIK2Q13002 908 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 RNF219Q5W0B1 726 aaPredicted RBP10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 PDE12Q6L8Q7 609 aaKnown RBP10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 RFLNAQ6ZTI6 216 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 SERPINA9Q86WD7 417 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 ADHFE1Q8IWW8 467 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 SYTL1Q8IYJ3 562 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 ATG16L2Q8NAA4 619 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 PIK3C3Q8NEB9 887 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 DNASE1L2Q92874 299 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 ULK4Q96C45 1275 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 LGALS12Q96DT0 336 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 YIPF6Q96EC8 236 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 DACH2Q96NX9 599 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 GPR63Q9BZJ6 419 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 TMEM184CQ9NVA4 438 aa10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 EIF3LQ9Y262 564 aaKnown RBP10.11□□□□□ -0.79
CDC42SE1-207ENST00000540998 A8MV72 311 aaPredicted RBP10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 FKBP9O95302 570 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 PRAMEF1O95521 474 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 DLGAP3O95886 979 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 HPRP00739 348 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms