RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 TUBGCP3Q96CW5 907 aa9.26□□□□□ -0.93
CLIP1-214ENST00000540539 CPB2Q96IY4 423 aa9.26□□□□□ -0.93
CLIP1-214ENST00000540539 MS4A4AQ96JQ5 239 aa9.26□□□□□ -0.93
CLIP1-214ENST00000540539 TRPM7Q96QT4 1865 aa9.26□□□□□ -0.93
CLIP1-214ENST00000540539 RNF39Q9H2S5 420 aa9.26□□□□□ -0.93
CLIP1-214ENST00000540539 XPNPEP3Q9NQH7 507 aa9.26□□□□□ -0.93
CLIP1-214ENST00000540539 NIT2Q9NQR4 276 aa9.26□□□□□ -0.93
CLIP1-214ENST00000540539 BIN3Q9NQY0 253 aa9.26□□□□□ -0.93
CLIP1-214ENST00000540539 AGPAT3Q9NRZ7 376 aa9.26□□□□□ -0.93
CLIP1-214ENST00000540539 ABCD2Q9UBJ2 740 aa9.26□□□□□ -0.93
CLIP1-214ENST00000540539 MIOXQ9UGB7 285 aa9.26□□□□□ -0.93
CLIP1-214ENST00000540539 SEPT9Q9UHD8 586 aaPredicted RBP9.26□□□□□ -0.93
CLIP1-214ENST00000540539 KCNK7Q9Y2U2 307 aa9.26□□□□□ -0.93
CLIP1-214ENST00000540539 PIAS3Q9Y6X2 628 aa9.26□□□□□ -0.93
CLIP1-214ENST00000540539 PAPPA2Q9BXP8 1791 aa9.26□□□□□ -0.93
CLIP1-214ENST00000540539 OR2A25A4D2G3 310 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 USP17L5A8MUK1 530 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 FABP7O15540 132 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 PAGE1O75459 146 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 OAZ2O95190 189 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 CXCL14O95715 111 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 ANGPTL1O95841 491 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 NDUFB10O96000 172 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 SNRPB2P08579 225 aaKnown RBP9.25□□□□□ -0.93
CLIP1-214ENST00000540539 PTPRAP18433 802 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 OGNP20774 298 aaKnown RBP9.25□□□□□ -0.93
CLIP1-214ENST00000540539 TNFSF8P32971 234 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 CSTF1Q05048 431 aaKnown RBP9.25□□□□□ -0.93
CLIP1-214ENST00000540539 CDK5R2Q13319 367 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 LARS2Q15031 903 aaKnown RBP9.25□□□□□ -0.93
CLIP1-214ENST00000540539 ZNF79Q15937 498 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 NOL9Q5SY16 702 aaKnown RBP9.25□□□□□ -0.93
CLIP1-214ENST00000540539 HACD2Q6Y1H2 254 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 MON1BQ7L1V2 547 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 ZDHHC17Q8IUH5 632 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 MAP4K3Q8IVH8 894 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 ZNF555Q8NEP9 628 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 KBTBD8Q8NFY9 601 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 CEP76Q8TAP6 659 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 ZNF431Q8TF32 576 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-214ENST00000540539 ASZ1Q8WWH4 475 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 TMBIM1Q969X1 311 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 FAF2Q96CS3 445 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 KCNA7Q96RP8 456 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 C11orf70Q9BRQ4 267 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 OR51M1Q9H341 326 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 DUSP21Q9H596 190 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 SMURF2Q9HAU4 748 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 ASAH2Q9NR71 780 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 ABCC13Q9NSE7 274 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 V9GYH0 126 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 PHIPQ8WWQ0 1821 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 SDHDO14521 159 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 MYL12BO14950 172 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 HPGDSO60760 199 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 MRPS14O60783 128 aaKnown RBP9.25□□□□□ -0.93
CLIP1-214ENST00000540539 NIPSNAP2O75323 286 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 TGM6O95932 706 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 CFDP00746 253 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-214ENST00000540539 HSD17B1P14061 328 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 PRF1P14222 555 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 MYL12AP19105 171 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 CHRM3P20309 590 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 FMO3P31513 532 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 TIE1P35590 1138 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 GPX4P36969 197 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-214ENST00000540539 CLCN5P51795 746 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 RRAS2P62070 204 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-214ENST00000540539 YBX1P67809 324 aaKnown RBP9.25□□□□□ -0.93
CLIP1-214ENST00000540539 ABATP80404 500 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 SEMA5AQ13591 1074 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 FGL2Q14314 439 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 USP17L6PQ6QN14 398 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 RTL10Q7L3V2 364 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 DCP1BQ8IZD4 617 aaKnown RBP9.25□□□□□ -0.93
CLIP1-214ENST00000540539 PLD6Q8N2A8 252 aaKnown RBP9.25□□□□□ -0.93
CLIP1-214ENST00000540539 ANKRD52Q8NB46 1076 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 SFT2D1Q8WV19 159 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 VAT1Q99536 393 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 SEPHS2Q99611 448 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 DPYSL5Q9BPU6 564 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 EIF2AK1Q9BQI3 630 aaKnown RBP9.25□□□□□ -0.93
CLIP1-214ENST00000540539 UGT2B28Q9BY64 529 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 GSX2Q9BZM3 304 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 ALG2Q9H553 416 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 IL1RL2Q9HB29 575 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 FAM49BQ9NUQ9 324 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 ATXN7L1Q9ULK2 861 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-214ENST00000540539 STAP1Q9ULZ2 295 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 MGAT4AQ9UM21 535 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 RNF6Q9Y252 685 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 HES2Q9Y543 173 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 PCDHB5Q9Y5E4 795 aa9.25□□□□□ -0.93
CLIP1-214ENST00000540539 LOC100506127A0A0U1RQW1 187 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 LOC390937A0A1W2PQ73 354 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 TMEM82A0PJX8 343 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 TMEM233B4DJY2 109 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 PCDH17O14917 1159 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 CHADO15335 359 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 CST8O60676 142 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms