RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 CDH17Q12864 832 aa10.86□□□□□ -0.67
PBX1-212ENST00000540236 SPP2Q13103 211 aa10.86□□□□□ -0.67
PBX1-212ENST00000540236 TKFCQ3LXA3 575 aa10.86□□□□□ -0.67
PBX1-212ENST00000540236 SLC16A13Q7RTY0 426 aa10.86□□□□□ -0.67
PBX1-212ENST00000540236 SVOPLQ8N434 492 aa10.86□□□□□ -0.67
PBX1-212ENST00000540236 FTMTQ8N4E7 242 aa10.86□□□□□ -0.67
PBX1-212ENST00000540236 MCPH1Q8NEM0 835 aa10.86□□□□□ -0.67
PBX1-212ENST00000540236 ANGPTL6Q8NI99 470 aa10.86□□□□□ -0.67
PBX1-212ENST00000540236 SH3KBP1Q96B97 665 aa10.86□□□□□ -0.67
PBX1-212ENST00000540236 C11orf54Q9H0W9 315 aaPredicted RBP10.86□□□□□ -0.67
PBX1-212ENST00000540236 COPS3Q9UNS2 423 aa10.86□□□□□ -0.67
PBX1-212ENST00000540236 CRYBG1Q9Y4K1 1723 aa10.86□□□□□ -0.67
PBX1-212ENST00000540236 PCDHGA12O60330 932 aa10.86□□□□□ -0.67
PBX1-212ENST00000540236 DDOSTP39656 456 aa10.86□□□□□ -0.67
PBX1-212ENST00000540236 PSMD5Q16401 504 aa10.86□□□□□ -0.67
PBX1-212ENST00000540236 RAET1EQ8TD07 263 aa10.86□□□□□ -0.67
PBX1-212ENST00000540236 PHF10Q8WUB8 498 aaKnown RBP10.86□□□□□ -0.67
PBX1-212ENST00000540236 KLHL6Q8WZ60 621 aa10.86□□□□□ -0.67
PBX1-212ENST00000540236 SYNDIG1Q9H7V2 258 aa10.86□□□□□ -0.67
PBX1-212ENST00000540236 RNF146Q9NTX7 359 aa10.86□□□□□ -0.67
PBX1-212ENST00000540236 H2AFY2Q9P0M6 372 aaPredicted RBP10.86□□□□□ -0.67
PBX1-212ENST00000540236 PADI2Q9Y2J8 665 aa10.86□□□□□ -0.67
PBX1-212ENST00000540236 PCDHA10Q9Y5I2 948 aa10.86□□□□□ -0.67
PBX1-212ENST00000540236 PRICKLE3O43900 615 aaPredicted RBP10.85□□□□□ -0.67
PBX1-212ENST00000540236 LY86O95711 162 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 SRCP12931 536 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 PTNP21246 168 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 ENPP1P22413 925 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 NFIXQ14938 502 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 SSX2Q16385 188 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 HKDC1Q2TB90 917 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 PIWIL4Q7Z3Z4 852 aaKnown RBP10.85□□□□□ -0.67
PBX1-212ENST00000540236 BPIFA1Q9NP55 256 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 NIT2Q9NQR4 276 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 MAP3K20Q9NYL2 800 aaKnown RBP10.85□□□□□ -0.67
PBX1-212ENST00000540236 NALCNQ8IZF0 1738 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 A8MT66 165 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 C5orf58C9J3I9 102 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 MT-CYBP00156 380 aaPredicted RBP10.85□□□□□ -0.67
PBX1-212ENST00000540236 PTPN2P17706 415 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 CREMQ03060 361 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 FAM182BQ5T319 152 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 CES5AQ6NT32 575 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 ZNF782Q6ZMW2 699 aaPredicted RBP10.85□□□□□ -0.67
PBX1-212ENST00000540236 TMPRSS9Q7Z410 1059 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 TMEM161BQ8NDZ6 487 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 TBX5Q99593 518 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 MRPS23Q9Y3D9 190 aaKnown RBP10.85□□□□□ -0.67
PBX1-212ENST00000540236 ENPP3O14638 875 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 PSMD10O75832 226 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 GATBO75879 557 aaKnown RBP10.85□□□□□ -0.67
PBX1-212ENST00000540236 BBOX1O75936 387 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 ATG12O94817 140 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 PSMA1P25786 263 aaKnown RBP10.85□□□□□ -0.67
PBX1-212ENST00000540236 MC2RQ01718 297 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 WDR49Q8IV35 697 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 SIGLEC10Q96LC7 697 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 DISC1C4P0D8 188 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 KPNA3O00505 521 aaPredicted RBP10.85□□□□□ -0.67
PBX1-212ENST00000540236 ALDH1A2O94788 518 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 SYPP08247 313 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 CD72P21854 359 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 DGKZQ13574 1117 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 SMYD5Q6GMV2 418 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 ADGRG5Q8IZF4 528 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 ANKRD53Q8N9V6 530 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 SLC38A4Q969I6 547 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 TSNAXQ99598 290 aaKnown RBP10.85□□□□□ -0.67
PBX1-212ENST00000540236 GON7Q9BXV9 100 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 GBA2Q9HCG7 927 aaPredicted RBP10.85□□□□□ -0.67
PBX1-212ENST00000540236 SCUBE2Q9NQ36 999 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 FAM86C1Q9NVL1 165 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 SPIN1Q9Y657 262 aaPredicted RBP10.85□□□□□ -0.67
PBX1-212ENST00000540236 ARFIP1P53367 373 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 BCL2L1Q07817 233 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 SSX6Q7RTT6 188 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 ZUFSPQ96AP4 578 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 NLNQ9BYT8 704 aa10.85□□□□□ -0.67
PBX1-212ENST00000540236 LOC105369274A0A096LPK9 316 aa10.84□□□□□ -0.67
PBX1-212ENST00000540236 A0A1W2PQL4 384 aaPredicted RBP10.84□□□□□ -0.67
PBX1-212ENST00000540236 NCAM2O15394 837 aa10.84□□□□□ -0.67
PBX1-212ENST00000540236 ENDOD1O94919 500 aa10.84□□□□□ -0.67
PBX1-212ENST00000540236 OR4F21O95013 312 aa10.84□□□□□ -0.67
PBX1-212ENST00000540236 SOX14O95416 240 aa10.84□□□□□ -0.67
PBX1-212ENST00000540236 DNASE1P24855 282 aa10.84□□□□□ -0.67
PBX1-212ENST00000540236 VIPR1P32241 457 aa10.84□□□□□ -0.67
PBX1-212ENST00000540236 MAGEA2P43356 314 aa10.84□□□□□ -0.67
PBX1-212ENST00000540236 ST3GAL4Q11206 333 aa10.84□□□□□ -0.67
PBX1-212ENST00000540236 TSC22D1Q15714 1073 aa10.84□□□□□ -0.67
PBX1-212ENST00000540236 PAGE3Q5JUK9 113 aa10.84□□□□□ -0.67
PBX1-212ENST00000540236 BRMS1LQ5PSV4 323 aa10.84□□□□□ -0.67
PBX1-212ENST00000540236 HECTD2Q5U5R9 776 aa10.84□□□□□ -0.67
PBX1-212ENST00000540236 C11orf96Q7Z7L8 435 aa10.84□□□□□ -0.67
PBX1-212ENST00000540236 OR4N4Q8N0Y3 316 aa10.84□□□□□ -0.67
PBX1-212ENST00000540236 ZNF671Q8TAW3 534 aa10.84□□□□□ -0.67
PBX1-212ENST00000540236 ADAMTS14Q8WXS8 1223 aa10.84□□□□□ -0.67
PBX1-212ENST00000540236 PYCR2Q96C36 320 aa10.84□□□□□ -0.67
PBX1-212ENST00000540236 C12orf66Q96MD2 445 aa10.84□□□□□ -0.67
PBX1-212ENST00000540236 POLR2J2Q9GZM3 115 aaKnown RBP10.84□□□□□ -0.67
PBX1-212ENST00000540236 RNF32Q9H0A6 362 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms