RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 CFAP221Q4G0U5 840 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 RNASEH2BQ5TBB1 312 aaKnown RBP5.89□□□□□ -1.47
MRE11-209ENST00000540013 NOTUMQ6P988 496 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 SLC27A1Q6PCB7 646 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 BRAT1Q6PJG6 821 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 MOB3CQ70IA8 216 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 PRSS45Q7RTY3 260 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 PEG10Q86TG7 708 aaKnown RBP5.89□□□□□ -1.47
MRE11-209ENST00000540013 CCDC13Q8IYE1 715 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 CCNYQ8ND76 341 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 DNAAF1Q8NEP3 725 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 ATG4AQ8WYN0 398 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 ZNF560Q96MR9 790 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 KATNB1Q9BVA0 655 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 RAB33BQ9H082 229 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 SPATC1LQ9H0A9 340 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 RAB17Q9H0T7 212 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 THAP2Q9H0W7 228 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 WNT5BQ9H1J7 359 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 YY1AP1Q9H869 796 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 RMND5AQ9H871 391 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 GPN1Q9HCN4 374 aaPredicted RBP5.89□□□□□ -1.47
MRE11-209ENST00000540013 FOXJ2Q9P0K8 574 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 UPB1Q9UBR1 384 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 KCNN3Q9UGI6 736 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 ATP6V1HQ9UI12 483 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 MAD2L2Q9UI95 211 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 TSPAN16Q9UKR8 245 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 PSME2Q9UL46 239 aa5.89□□□□□ -1.47
MRE11-209ENST00000540013 LAMB1P07942 1786 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 OTOFQ9HC10 1997 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 A0A087WZY1 265 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 GOLGA6L7A0A1B0GV03 622 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 E9PBE3 544 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 UBE2Q2LH0YL09 131 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 SPOPO43791 374 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 STRNO43815 780 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 SELENOFO60613 162 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 E2F6O75461 281 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 FRAT2O75474 233 aaPredicted RBP5.88□□□□□ -1.47
MRE11-209ENST00000540013 GPC4O75487 556 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 OR6B1O95007 311 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 MOCS3O95396 460 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 PCCBP05166 539 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 CSF2RAP15509 400 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 ZNF182P17025 639 aaPredicted RBP5.88□□□□□ -1.47
MRE11-209ENST00000540013 GJA1P17302 382 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 ACADLP28330 430 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 CLCNKAP51800 687 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 CACNA2D1P54289 1103 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 OAZ1P54368 228 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 CDH13P55290 713 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 SIM1P81133 766 aaPredicted RBP5.88□□□□□ -1.47
MRE11-209ENST00000540013 SPIBQ01892 262 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 PDZK1IP1Q13113 114 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 DNASE1L3Q13609 305 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 GIT2Q14161 759 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 DRAP1Q14919 205 aaPredicted RBP5.88□□□□□ -1.47
MRE11-209ENST00000540013 VEPH1Q14D04 833 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 SLC39A14Q15043 492 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 UGCGQ16739 394 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 KCTD21Q4G0X4 260 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 EPC2Q52LR7 807 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 CFAP157Q5JU67 520 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 PRAMEF8Q5VWM4 474 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 OR6B2Q6IFH4 312 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 AADACL2Q6P093 401 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 CASC4Q6P4E1 433 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 TMEM182Q6ZP80 229 aaPredicted RBP5.88□□□□□ -1.47
MRE11-209ENST00000540013 MOB2Q70IA6 237 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 PRSS42Q7Z5A4 293 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 WDR53Q7Z5U6 358 aaPredicted RBP5.88□□□□□ -1.47
MRE11-209ENST00000540013 NEK8Q86SG6 692 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 ZNF573Q86YE8 665 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 RASAL3Q86YV0 1011 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 BBS5Q8N3I7 341 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 ARL14Q8N4G2 192 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 EIF1ADQ8N9N8 165 aaKnown RBP5.88□□□□□ -1.47
MRE11-209ENST00000540013 SLC4A11Q8NBS3 891 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 FAM110DQ8TAY7 271 aaPredicted RBP5.88□□□□□ -1.47
MRE11-209ENST00000540013 HEXDCQ8WVB3 486 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 CCDC51Q96ER9 411 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 WDYHV1Q96HA8 205 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 PIWIL1Q96J94 861 aaKnown RBP5.88□□□□□ -1.47
MRE11-209ENST00000540013 AGAP3Q96P47 875 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 MEIS3Q99687 375 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 ZSCAN5AQ9BUG6 496 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 ELOVL1Q9BW60 279 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 S1PR5Q9H228 398 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 SLITRK6Q9H5Y7 841 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 MINDY3Q9H8M7 445 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 PALMDQ9NP74 551 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 TMEM161AQ9NX61 479 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 TEKT2Q9UIF3 430 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 DNPEPQ9ULA0 475 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 PCDHAC2Q9Y5I4 1007 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 MAU2Q9Y6X3 613 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 KIAA0100Q14667 2235 aaKnown RBP5.88□□□□□ -1.47
MRE11-209ENST00000540013 PDE4DIPQ5VU43 2346 aa5.88□□□□□ -1.47
MRE11-209ENST00000540013 TRIM49BA6NDI0 452 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms