RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 RAB11FIP5Q9BXF6 653 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 PARVBQ9HBI1 364 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 SNX15Q9NRS6 342 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 LOXL2Q9Y4K0 774 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 BAHCC1Q9P281 2608 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 SNRNP200O75643 2136 aaKnown RBP12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 KMT2BQ9UMN6 2715 aaPredicted RBP12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 IGHV5-51A0A0C4DH38 117 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 TRABD2BA6NFA1 517 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 TLCD2A6NGC4 264 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 TRIM49D1C9J1S8 452 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 MATN2O00339 956 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 HGSO14964 777 aaPredicted RBP12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 KRT38O76015 456 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 SLC16A8O95907 504 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 ALDOAP04075 364 aaKnown RBP12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 MPOP05164 745 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 C2P06681 752 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 ANKRD34CP0C6C1 535 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 ERGP11308 486 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 CD1DP15813 335 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 CDH3P22223 829 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 CNTFP26441 200 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 LSSP48449 732 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 SERPINB8P50452 374 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 IRF9Q00978 393 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 DLG1Q12959 904 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 CSHL1Q14406 222 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 TSNQ15631 228 aaKnown RBP12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 CYP2A13Q16696 494 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 ANKS6Q68DC2 871 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 SPESP1Q6UW49 350 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 SBSNQ6UWP8 590 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 MBOAT1Q6ZNC8 495 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 TRIM73Q86UV7 250 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 FAM20CQ8IXL6 584 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 PPFIBP2Q8ND30 876 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 WDR36Q8NI36 951 aaKnown RBP12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 HMGCLL1Q8TB92 370 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 MCOLN3Q8TDD5 553 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 ZNF480Q8WV37 535 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 KLHL6Q8WZ60 621 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 ANKRD7Q92527 254 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 PRR11Q96HE9 360 aaPredicted RBP12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 UBXN10Q96LJ8 280 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 CCDC77Q9BR77 488 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 DERL2Q9GZP9 239 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 ZNF768Q9H5H4 540 aaKnown RBP12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 OCIAD1Q9NX40 245 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 CTNNAL1Q9UBT7 734 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 FETUBQ9UGM5 382 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 LNPEPQ9UIQ6 1025 aa12.29□□□□□ -0.44
TSPAN9-207ENST00000539631 A0A087X1B8 175 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 A0A096LPK6 155 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 A0A1W2PPV9 198 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 EFCAB7A8K855 629 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 TOX3O15405 576 aaPredicted RBP12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 PRICKLE3O43900 615 aaPredicted RBP12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 TUBBP07437 444 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 SNRPAP09012 282 aaKnown RBP12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 HIST1H2AGP0C0S8 130 aaPredicted RBP12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 FGF3P11487 239 aaPredicted RBP12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 CCL4P13236 92 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 PVRP15151 417 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 ITIH1P19827 911 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 HIST1H2ADP20671 130 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 PSMB5P28074 263 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 IMPA1P29218 277 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 TYK2P29597 1187 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 OAS2P29728 719 aaKnown RBP12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 CSTF2P33240 577 aaKnown RBP eCLIP12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 ETV5P41161 510 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 MAGEA12P43365 314 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 PNLIPRP1P54315 467 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 GABREP78334 506 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 EIF3IQ13347 325 aaKnown RBP12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 KIR2DS3Q14952 304 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 ARHGAP19Q14CB8 494 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 PPP1R3AQ16821 1122 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 ST3GAL2Q16842 350 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 SUSD1Q6UWL2 747 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 TBC1D1Q86TI0 1168 aaPredicted RBP12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 LRRC56Q8IYG6 542 aaPredicted RBP12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 AGBL5Q8NDL9 886 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 OR2W6PQ8NHA6 318 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 KCTD4Q8WVF5 259 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 ISL2Q96A47 359 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 PTERQ96BW5 349 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 NXNL1Q96CM4 212 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 HIST1H2AHQ96KK5 128 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 CCDC138Q96M89 665 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 CMKLR1Q99788 373 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 HIST1H2AJQ99878 128 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 H2AFJQ9BTM1 129 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 NRSN2Q9GZP1 204 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 KLHL25Q9H0H3 589 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 VPS11Q9H270 941 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 C1GALT1Q9NS00 363 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 IGSF5Q9NSI5 407 aa12.28□□□□□ -0.44
TSPAN9-207ENST00000539631 UTP6Q9NYH9 597 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms