RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 KDELR3O43731 214 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 ANXA8P13928 327 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 ATP1B2P14415 290 aaPredicted RBP6.35□□□□□ -1.39
LSAMP-207ENST00000539563 CDH12P55289 794 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 SLC10A7Q0GE19 358 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 SMYD5Q6GMV2 418 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 AHSA2Q719I0 299 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 ZNF554Q86TJ5 538 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 P2RY8Q86VZ1 359 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 STX12Q86Y82 276 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 AQP12AQ8IXF9 295 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 CBR4Q8N4T8 237 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 FBXO15Q8NCQ5 510 aaPredicted RBP6.35□□□□□ -1.39
LSAMP-207ENST00000539563 ARNTL2Q8WYA1 636 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 OVCA2Q8WZ82 227 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 DIRAS2Q96HU8 199 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 BCO2Q9BYV7 579 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 SIX2Q9NPC8 291 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.35□□□□□ -1.39
LSAMP-207ENST00000539563 PSIP1O75475 530 aaKnown RBP6.35□□□□□ -1.39
LSAMP-207ENST00000539563 AGXTP21549 392 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 DNAJA1P31689 397 aaKnown RBP6.35□□□□□ -1.39
LSAMP-207ENST00000539563 CASRP41180 1078 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 EEFSECP57772 596 aaKnown RBP6.35□□□□□ -1.39
LSAMP-207ENST00000539563 FSTL1Q12841 308 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 SCARB2Q14108 478 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 AKIRIN2Q53H80 203 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 NIPAL1Q6NVV3 410 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 PAOXQ6QHF9 649 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 ADGRD2Q7Z7M1 963 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 SYVN1Q86TM6 617 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 CCDC54Q8NEL0 328 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 OR2AJ1Q8NGZ0 328 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 OR52J3Q8NH60 311 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 SCAMP5Q8TAC9 235 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 OXSMQ9NWU1 459 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 RPL36Q9Y3U8 105 aaKnown RBP6.35□□□□□ -1.39
LSAMP-207ENST00000539563 RAB15P59190 212 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 PDGFRLQ15198 375 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 FAM189A2Q15884 450 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 ENPP7Q6UWV6 458 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 TMEM145Q8NBT3 493 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 CLEC4CQ8WTT0 213 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 C15orf40Q8WUR7 153 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 A8MUI8 341 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 ZNF208O43345 1280 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 MYCLP1P12525 358 aaPredicted RBP6.35□□□□□ -1.39
LSAMP-207ENST00000539563 NR4A1P22736 598 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 ITGA3P26006 1051 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 CCKBRP32239 447 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 ATXN1P54253 815 aaKnown RBP6.35□□□□□ -1.39
LSAMP-207ENST00000539563 PUDPQ08623 228 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 MBLAC2Q68D91 279 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 GDF6Q6KF10 455 aaPredicted RBP6.35□□□□□ -1.39
LSAMP-207ENST00000539563 FAM43BQ6ZT52 329 aaPredicted RBP6.35□□□□□ -1.39
LSAMP-207ENST00000539563 USP30Q70CQ3 517 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 CDKN2AIPNLQ96HQ2 116 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 PTPN18Q99952 460 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 WDR26Q9H7D7 661 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 COQ10BQ9H8M1 238 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 FLRT1Q9NZU1 646 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 hCG_2039718K7EN88 272 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 SCDO00767 359 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 H6PDO95479 791 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 PGDP52209 483 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 SERINC3Q13530 473 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 KCTD8Q6ZWB6 473 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 GPR151Q8TDV0 419 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 NR4A3Q92570 626 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 HPS1Q92902 700 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 MED28Q9H204 178 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 DENND2DQ9H6A0 471 aaPredicted RBP6.35□□□□□ -1.39
LSAMP-207ENST00000539563 C11orf16Q9NQ32 467 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 SDHAF3Q9NRP4 125 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 POMPQ9Y244 141 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 PCDHGB5Q9Y5G0 923 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 CLCA3PQ9Y6N3 262 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 A0A1W2PRU2 124 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 FAM159BA6NKW6 160 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 SEMA3AQ14563 771 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 NUDT13Q86X67 352 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 C10orf82Q8WW14 230 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 COPS4Q9BT78 406 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 GSDMCQ9BYG8 508 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 XPNPEP1Q9NQW7 623 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 STOML2Q9UJZ1 356 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 PCDHGA2Q9Y5H1 932 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 TEX264Q9Y6I9 313 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 EFCAB9A8MZ26 197 aa6.34□□□□□ -1.39
LSAMP-207ENST00000539563 ZNF487B1APH4 448 aa6.34□□□□□ -1.39
LSAMP-207ENST00000539563 C9J4A7 227 aa6.34□□□□□ -1.39
LSAMP-207ENST00000539563 E7ENX8 843 aa6.34□□□□□ -1.39
LSAMP-207ENST00000539563 CYP11A1P05108 521 aa6.34□□□□□ -1.39
LSAMP-207ENST00000539563 HMGN1P05114 100 aa6.34□□□□□ -1.39
LSAMP-207ENST00000539563 DSTNP60981 165 aa6.34□□□□□ -1.39
LSAMP-207ENST00000539563 TARDBPQ13148 414 aaKnown RBP eCLIP6.34□□□□□ -1.39
LSAMP-207ENST00000539563 TLR1Q15399 786 aa6.34□□□□□ -1.39
LSAMP-207ENST00000539563 UBAP2Q5T6F2 1119 aaKnown RBP6.34□□□□□ -1.39
LSAMP-207ENST00000539563 CDCA2Q69YH5 1023 aaPredicted RBP6.34□□□□□ -1.39
LSAMP-207ENST00000539563 RASSF6Q6ZTQ3 369 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms