RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 MPOP05164 745 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 PYGBP11216 843 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 CREB1P16220 341 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 NDUFS1P28331 727 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 IMPA1P29218 277 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 TYK2P29597 1187 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 MAPK9P45984 424 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 CCT5P48643 541 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 SERPINB8P50452 374 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 KPNA2P52292 529 aaKnown RBP12.58□□□□□ -0.4
CCDC42-202ENST00000539522 GYS2P54840 703 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 GPLD1P80108 840 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 CBX1P83916 185 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 CSHL1Q14406 222 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 CYP2A13Q16696 494 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 C18orf21Q32NC0 220 aaPredicted RBP12.58□□□□□ -0.4
CCDC42-202ENST00000539522 HES3Q5TGS1 186 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 WDR74Q6RFH5 385 aaPredicted RBP12.58□□□□□ -0.4
CCDC42-202ENST00000539522 CDHR3Q6ZTQ4 885 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 AMIGO1Q86WK6 493 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 FAM20CQ8IXL6 584 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 MYO1HQ8N1T3 1032 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 NKAPQ8N5F7 415 aaKnown RBP12.58□□□□□ -0.4
CCDC42-202ENST00000539522 C2orf73Q8N5S3 287 aaPredicted RBP12.58□□□□□ -0.4
CCDC42-202ENST00000539522 DCBLD1Q8N8Z6 715 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 BANPQ8N9N5 519 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 PPFIBP2Q8ND30 876 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 ZNF480Q8WV37 535 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 SKA2Q8WVK7 121 aaPredicted RBP12.58□□□□□ -0.4
CCDC42-202ENST00000539522 SH3KBP1Q96B97 665 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 TSPAN17Q96FV3 270 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 CABS1Q96KC9 395 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 OR2A14Q96R47 310 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 ATOH8Q96SQ7 321 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 SELENOSQ9BQE4 189 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.58□□□□□ -0.4
CCDC42-202ENST00000539522 RAB33BQ9H082 229 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 SYTL2Q9HCH5 934 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 NKIRAS1Q9NYS0 192 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 DCDC2Q9UHG0 476 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 POLG2Q9UHN1 485 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 ENTPD2Q9Y5L3 495 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 TMEM120BA0PK00 339 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 SLC16A5O15375 505 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 CAPN5O15484 640 aaPredicted RBP12.57□□□□□ -0.4
CCDC42-202ENST00000539522 TYROBPO43914 113 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 NRP2O60462 931 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 PRAMEF10O60809 474 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 ZWINTO95229 277 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 CPNE6O95741 557 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 MT-CO3P00414 261 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 CHRM5P08912 532 aaPredicted RBP12.57□□□□□ -0.4
CCDC42-202ENST00000539522 THRAP10827 490 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 MTHFD2P13995 350 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 POLR2CP19387 275 aaPredicted RBP12.57□□□□□ -0.4
CCDC42-202ENST00000539522 SPINK2P20155 84 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 PSMB5P28074 263 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 CRABP2P29373 138 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 MDH1P40925 334 aaKnown RBP12.57□□□□□ -0.4
CCDC42-202ENST00000539522 RGS4P49798 205 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 ATP1A2P50993 1020 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 RAB28P51157 221 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 SLC12A2P55011 1212 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 CAMK2BQ13554 666 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 TMPRSS7Q7RTY8 843 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 C4orf33Q8N1A6 199 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 AVL9Q8NBF6 648 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 OR9A1PQ8NGU1 263 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 OR2L8Q8NGY9 312 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 HMGCLL1Q8TB92 370 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 LCN9Q8WX39 176 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 NCSTNQ92542 709 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 RAD51AP1Q96B01 352 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 GFM1Q96RP9 751 aaKnown RBP12.57□□□□□ -0.4
CCDC42-202ENST00000539522 SYNPO2LQ9H987 977 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 PARVBQ9HBI1 364 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 SEMA5BQ9P283 1151 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 STOX2Q9P2F5 926 aaPredicted RBP12.57□□□□□ -0.4
CCDC42-202ENST00000539522 EPHA6Q9UF33 1036 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 SH2B3Q9UQQ2 575 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 APOBEC2Q9Y235 224 aaKnown RBP12.57□□□□□ -0.4
CCDC42-202ENST00000539522 ACOT9Q9Y305 439 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 ASB1Q9Y576 335 aa12.57□□□□□ -0.4
CCDC42-202ENST00000539522 SPTBN2O15020 2390 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 PCM1Q15154 2024 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 IGHV5-51A0A0C4DH38 117 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 TARM1B6A8C7 271 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 E7ENX8 843 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 GOLGA8RI6L899 631 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 COPEO14579 308 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 TM9SF1O15321 606 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 TAPBPO15533 448 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 HCRTR1O43613 425 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 HYAL3O43820 417 aaPredicted RBP12.56□□□□□ -0.4
CCDC42-202ENST00000539522 SPAG7O75391 227 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 KLHL2O95198 593 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 C8GP07360 202 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 CHN1P15882 459 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 KCNA4P22459 653 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 CRHR1P34998 444 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms