RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 FAM234BA2RU67 622 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 NDUFB5O43674 189 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 TBL1XO60907 577 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 AOC2O75106 756 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 ESR1P03372 595 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 MYCLP1P12525 358 aaPredicted RBP12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 EFNA1P20827 205 aaPredicted RBP12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 SEMG2Q02383 582 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 SP3Q02447 781 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 GRSF1Q12849 480 aaKnown RBP eCLIP12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 TRAF3Q13114 568 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 FXNQ16595 210 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 FAM98BQ52LJ0 330 aaKnown RBP12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 PAPD5Q8NDF8 572 aaKnown RBP12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 CDK5RAP1Q96SZ6 601 aaKnown RBP12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 RNF167Q9H6Y7 350 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 PRM3Q9NNZ6 103 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 SLC6A13Q9NSD5 602 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 ZIM2Q9NZV7 527 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 SRRDQ9UH36 339 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 A8MV72 311 aaPredicted RBP12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 A8MX80 341 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 DLGAP3O95886 979 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 CHEK2O96017 543 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 SLC2A4P14672 509 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 HMGCLP35914 325 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 HSPA7P48741 367 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 SELENBP1Q13228 472 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 KIAA0040Q15053 153 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 PHKG1Q16816 387 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 COLEC12Q5KU26 742 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 APCDD1Q8J025 514 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 BPIFB1Q8TDL5 484 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 HEBP1Q9NRV9 189 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 CLEC4EQ9ULY5 219 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 LOC100130705A0A1B0GUX0 176 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 A0A1W2PQ67 120 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 SLC1A7O00341 560 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 DNTTP04053 509 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 ANXA6P08133 673 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 CSKP41240 450 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 GTF2H2Q13888 395 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 SCN5AQ14524 2016 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 ZNF846Q147U1 533 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 PCBP2Q15366 365 aaKnown RBP eCLIP12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 GTF2H2CQ6P1K8 395 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 CYP20A1Q6UW02 462 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 SERPINA9Q86WD7 417 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 RIMKLAQ8IXN7 391 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 GOLM1Q8NBJ4 401 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 CD99L2Q8TCZ2 262 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 VOPP1Q96AW1 172 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 LRRC3Q9BY71 257 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 C6orf62Q9GZU0 229 aaPredicted RBP12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 RETREG1Q9H6L5 497 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 ACTR8Q9H981 624 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 HMG20AQ9NP66 347 aa12.28□□□□□ -0.44
SFSWAP-208ENST00000539506 A0A0C4DFX4 3053 aa12.27□□□□□ -0.44
SFSWAP-208ENST00000539506 H0Y626 953 aa12.27□□□□□ -0.44
SFSWAP-208ENST00000539506 FFAR2O15552 330 aa12.27□□□□□ -0.44
SFSWAP-208ENST00000539506 LCKP06239 509 aa12.27□□□□□ -0.44
SFSWAP-208ENST00000539506 SPNP16150 400 aa12.27□□□□□ -0.44
SFSWAP-208ENST00000539506 TUFMP49411 452 aaKnown RBP12.27□□□□□ -0.44
SFSWAP-208ENST00000539506 EEFSECP57772 596 aaKnown RBP12.27□□□□□ -0.44
SFSWAP-208ENST00000539506 RHOAP61586 193 aa12.27□□□□□ -0.44
SFSWAP-208ENST00000539506 CACNG1Q06432 222 aa12.27□□□□□ -0.44
SFSWAP-208ENST00000539506 ELAVL2Q12926 359 aaKnown RBP12.27□□□□□ -0.44
SFSWAP-208ENST00000539506 EPS8Q12929 822 aa12.27□□□□□ -0.44
SFSWAP-208ENST00000539506 SKIV2LQ15477 1246 aaKnown RBP12.27□□□□□ -0.44
SFSWAP-208ENST00000539506 AASDHQ4L235 1098 aaPredicted RBP12.27□□□□□ -0.44
SFSWAP-208ENST00000539506 Q6ZPB1 254 aaPredicted RBP12.27□□□□□ -0.44
SFSWAP-208ENST00000539506 HID1Q8IV36 788 aa12.27□□□□□ -0.44
SFSWAP-208ENST00000539506 FAM83FQ8NEG4 500 aaPredicted RBP12.27□□□□□ -0.44
SFSWAP-208ENST00000539506 OR2T12Q8NG77 320 aa12.27□□□□□ -0.44
SFSWAP-208ENST00000539506 SLC47A1Q96FL8 570 aa12.27□□□□□ -0.44
SFSWAP-208ENST00000539506 PDLIM5Q96HC4 596 aaKnown RBP12.27□□□□□ -0.44
SFSWAP-208ENST00000539506 GPR63Q9BZJ6 419 aa12.27□□□□□ -0.44
SFSWAP-208ENST00000539506 IPPKQ9H8X2 491 aa12.27□□□□□ -0.44
SFSWAP-208ENST00000539506 VPS9D1Q9Y2B5 631 aa12.27□□□□□ -0.44
SFSWAP-208ENST00000539506 ATP11BQ9Y2G3 1177 aa12.27□□□□□ -0.44
SFSWAP-208ENST00000539506 PRMT5O14744 637 aaPredicted RBP12.27□□□□□ -0.45
SFSWAP-208ENST00000539506 ZNF682O95780 498 aa12.27□□□□□ -0.45
SFSWAP-208ENST00000539506 ENO2P09104 434 aaPredicted RBP12.27□□□□□ -0.45
SFSWAP-208ENST00000539506 CDH1P12830 882 aa12.27□□□□□ -0.45
SFSWAP-208ENST00000539506 GSTM2P28161 218 aa12.27□□□□□ -0.45
SFSWAP-208ENST00000539506 GJA8P48165 433 aa12.27□□□□□ -0.45
SFSWAP-208ENST00000539506 RPL38P63173 70 aaKnown RBP12.27□□□□□ -0.45
SFSWAP-208ENST00000539506 PRKG2Q13237 762 aa12.27□□□□□ -0.45
SFSWAP-208ENST00000539506 NPTX1Q15818 432 aa12.27□□□□□ -0.45
SFSWAP-208ENST00000539506 CDKN3Q16667 212 aa12.27□□□□□ -0.45
SFSWAP-208ENST00000539506 AP5B1Q2VPB7 878 aa12.27□□□□□ -0.45
SFSWAP-208ENST00000539506 FAM174BQ3ZCQ3 159 aa12.27□□□□□ -0.45
SFSWAP-208ENST00000539506 MBOAT1Q6ZNC8 495 aa12.27□□□□□ -0.45
SFSWAP-208ENST00000539506 ZSWIM9Q86XI8 627 aa12.27□□□□□ -0.45
SFSWAP-208ENST00000539506 SYTL1Q8IYJ3 562 aa12.27□□□□□ -0.45
SFSWAP-208ENST00000539506 DPP10Q8N608 796 aa12.27□□□□□ -0.45
SFSWAP-208ENST00000539506 ZNF583Q96ND8 569 aa12.27□□□□□ -0.45
SFSWAP-208ENST00000539506 DACH2Q96NX9 599 aa12.27□□□□□ -0.45
SFSWAP-208ENST00000539506 CGREF1Q99674 301 aa12.27□□□□□ -0.45
SFSWAP-208ENST00000539506 IL26Q9NPH9 171 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms