RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 CCL11P51671 97 aa21.38■■□□□ 1.01
SCARB1-206ENST00000539320 KCNJ11Q14654 390 aa21.38■■□□□ 1.01
SCARB1-206ENST00000539320 TRIP13Q15645 432 aaPredicted RBP21.38■■□□□ 1.01
SCARB1-206ENST00000539320 KCTD19Q17RG1 926 aaPredicted RBP21.38■■□□□ 1.01
SCARB1-206ENST00000539320 C1orf189Q5VU69 101 aa21.38■■□□□ 1.01
SCARB1-206ENST00000539320 MRNIPQ6NTE8 343 aa21.38■■□□□ 1.01
SCARB1-206ENST00000539320 TLDC1Q6P9B6 456 aa21.38■■□□□ 1.01
SCARB1-206ENST00000539320 CES3Q6UWW8 571 aa21.38■■□□□ 1.01
SCARB1-206ENST00000539320 OTOAQ7RTW8 1153 aa21.38■■□□□ 1.01
SCARB1-206ENST00000539320 FAM20CQ8IXL6 584 aa21.38■■□□□ 1.01
SCARB1-206ENST00000539320 DNAJC22Q8N4W6 341 aa21.38■■□□□ 1.01
SCARB1-206ENST00000539320 ZNF655Q8N720 491 aaPredicted RBP21.38■■□□□ 1.01
SCARB1-206ENST00000539320 LMNTD1Q8N9Z9 388 aa21.38■■□□□ 1.01
SCARB1-206ENST00000539320 GBP5Q96PP8 586 aa21.38■■□□□ 1.01
SCARB1-206ENST00000539320 TXLNGQ9NUQ3 528 aa21.38■■□□□ 1.01
SCARB1-206ENST00000539320 SLC39A10Q9ULF5 831 aa21.38■■□□□ 1.01
SCARB1-206ENST00000539320 CTSBP07858 339 aa21.37■■□□□ 1.01
SCARB1-206ENST00000539320 MAGEA6P43360 314 aa21.37■■□□□ 1.01
SCARB1-206ENST00000539320 BDKRB1P46663 353 aa21.37■■□□□ 1.01
SCARB1-206ENST00000539320 TERF1P54274 439 aa21.37■■□□□ 1.01
SCARB1-206ENST00000539320 GPS1Q13098 491 aa21.37■■□□□ 1.01
SCARB1-206ENST00000539320 IGFBP7Q16270 282 aa21.37■■□□□ 1.01
SCARB1-206ENST00000539320 TYSND1Q2T9J0 566 aa21.37■■□□□ 1.01
SCARB1-206ENST00000539320 CTSL3PQ5NE16 218 aa21.37■■□□□ 1.01
SCARB1-206ENST00000539320 RNF187Q5TA31 235 aaPredicted RBP21.37■■□□□ 1.01
SCARB1-206ENST00000539320 KIAA0930Q6ICG6 404 aaPredicted RBP21.37■■□□□ 1.01
SCARB1-206ENST00000539320 TTC23LQ6PF05 361 aa21.37■■□□□ 1.01
SCARB1-206ENST00000539320 SDCCAG8Q86SQ7 713 aaPredicted RBP21.37■■□□□ 1.01
SCARB1-206ENST00000539320 C2orf73Q8N5S3 287 aaPredicted RBP21.37■■□□□ 1.01
SCARB1-206ENST00000539320 ZBTB2Q8N680 514 aa21.37■■□□□ 1.01
SCARB1-206ENST00000539320 SKA2Q8WVK7 121 aaPredicted RBP21.37■■□□□ 1.01
SCARB1-206ENST00000539320 LPGAT1Q92604 370 aa21.37■■□□□ 1.01
SCARB1-206ENST00000539320 INTS7Q9NVH2 962 aaKnown RBP21.37■■□□□ 1.01
SCARB1-206ENST00000539320 EURLQ9NYK6 297 aa21.37■■□□□ 1.01
SCARB1-206ENST00000539320 DHCR7Q9UBM7 475 aaKnown RBP21.37■■□□□ 1.01
SCARB1-206ENST00000539320 GPN3Q9UHW5 284 aaPredicted RBP21.37■■□□□ 1.01
SCARB1-206ENST00000539320 KLHL20Q9Y2M5 609 aa21.37■■□□□ 1.01
SCARB1-206ENST00000539320 MRFAP1Q9Y605 127 aa21.37■■□□□ 1.01
SCARB1-206ENST00000539320 LRRK2Q5S007 2527 aa21.37■■□□□ 1.01
SCARB1-206ENST00000539320 TNRC6AQ8NDV7 1962 aaKnown RBP21.37■■□□□ 1.01
SCARB1-206ENST00000539320 PFDN6O15212 129 aa21.36■■□□□ 1.01
SCARB1-206ENST00000539320 SARNPP82979 210 aaKnown RBP21.36■■□□□ 1.01
SCARB1-206ENST00000539320 ATP1A4Q13733 1029 aa21.36■■□□□ 1.01
SCARB1-206ENST00000539320 ARMC3Q5W041 872 aa21.36■■□□□ 1.01
SCARB1-206ENST00000539320 TMEM102Q8N9M5 508 aaPredicted RBP21.36■■□□□ 1.01
SCARB1-206ENST00000539320 RAD51AP1Q96B01 352 aa21.36■■□□□ 1.01
SCARB1-206ENST00000539320 MLXIPLQ9NP71 852 aa21.36■■□□□ 1.01
SCARB1-206ENST00000539320 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.36■■□□□ 1.01
SCARB1-206ENST00000539320 NDOR1Q9UHB4 597 aa21.36■■□□□ 1.01
SCARB1-206ENST00000539320 NFS1Q9Y697 457 aa21.36■■□□□ 1.01
SCARB1-206ENST00000539320 SPENQ96T58 3664 aaKnown RBP21.35■■□□□ 1.01
SCARB1-206ENST00000539320 GOLGA8KD6RF30 607 aa21.35■■□□□ 1.01
SCARB1-206ENST00000539320 GOLGA8TH3BQL2 631 aa21.35■■□□□ 1.01
SCARB1-206ENST00000539320 CEACAM4O75871 244 aa21.35■■□□□ 1.01
SCARB1-206ENST00000539320 OGNP20774 298 aaKnown RBP21.35■■□□□ 1.01
SCARB1-206ENST00000539320 OTX2P32243 289 aa21.35■■□□□ 1.01
SCARB1-206ENST00000539320 RRADP55042 308 aa21.35■■□□□ 1.01
SCARB1-206ENST00000539320 DCDP81605 110 aaKnown RBP21.35■■□□□ 1.01
SCARB1-206ENST00000539320 MLIPQ5VWP3 458 aa21.35■■□□□ 1.01
SCARB1-206ENST00000539320 PAPD7Q5XG87 772 aaKnown RBP21.35■■□□□ 1.01
SCARB1-206ENST00000539320 TTC27Q6P3X3 843 aa21.35■■□□□ 1.01
SCARB1-206ENST00000539320 MRGPREQ86SM8 312 aa21.35■■□□□ 1.01
SCARB1-206ENST00000539320 RAB42Q8N4Z0 105 aa21.35■■□□□ 1.01
SCARB1-206ENST00000539320 FOPNLQ96NB1 174 aa21.35■■□□□ 1.01
SCARB1-206ENST00000539320 BIRC8Q96P09 236 aa21.35■■□□□ 1.01
SCARB1-206ENST00000539320 NDC1Q9BTX1 674 aa21.35■■□□□ 1.01
SCARB1-206ENST00000539320 IFT80Q9P2H3 777 aaPredicted RBP21.35■■□□□ 1.01
SCARB1-206ENST00000539320 G3BP2Q9UN86 482 aaKnown RBP21.35■■□□□ 1.01
SCARB1-206ENST00000539320 RUVBL2Q9Y230 463 aaKnown RBP21.35■■□□□ 1.01
SCARB1-206ENST00000539320 H3BMM5 538 aa21.34■■□□□ 1.01
SCARB1-206ENST00000539320 NIPSNAP2O75323 286 aa21.34■■□□□ 1.01
SCARB1-206ENST00000539320 KLF7O75840 302 aaPredicted RBP21.34■■□□□ 1.01
SCARB1-206ENST00000539320 FKBP9O95302 570 aa21.34■■□□□ 1.01
SCARB1-206ENST00000539320 C1orf105O95561 183 aa21.34■■□□□ 1.01
SCARB1-206ENST00000539320 KRT14P02533 472 aa21.34■■□□□ 1.01
SCARB1-206ENST00000539320 ATXN8OSP0DMR3 200 aa21.34■■□□□ 1.01
SCARB1-206ENST00000539320 PAMP19021 973 aa21.34■■□□□ 1.01
SCARB1-206ENST00000539320 FMO4P31512 558 aa21.34■■□□□ 1.01
SCARB1-206ENST00000539320 CCNFP41002 786 aa21.34■■□□□ 1.01
SCARB1-206ENST00000539320 FOLR3P41439 243 aa21.34■■□□□ 1.01
SCARB1-206ENST00000539320 SLC9A5Q14940 896 aa21.34■■□□□ 1.01
SCARB1-206ENST00000539320 ANKRD22Q5VYY1 191 aa21.34■■□□□ 1.01
SCARB1-206ENST00000539320 CASC4Q6P4E1 433 aa21.34■■□□□ 1.01
SCARB1-206ENST00000539320 MED25Q71SY5 747 aa21.34■■□□□ 1.01
SCARB1-206ENST00000539320 RASGEF1CQ8N431 466 aa21.34■■□□□ 1.01
SCARB1-206ENST00000539320 DLG3Q92796 817 aa21.34■■□□□ 1.01
SCARB1-206ENST00000539320 MAGOHBQ96A72 148 aaKnown RBP21.34■■□□□ 1.01
SCARB1-206ENST00000539320 MIB2Q96AX9 1013 aa21.34■■□□□ 1.01
SCARB1-206ENST00000539320 TCF12Q99081 682 aa21.34■■□□□ 1.01
SCARB1-206ENST00000539320 SAMD15Q9P1V8 674 aa21.34■■□□□ 1.01
SCARB1-206ENST00000539320 PLAAQ9Y263 795 aa21.34■■□□□ 1.01
SCARB1-206ENST00000539320 PTRH2Q9Y3E5 179 aaKnown RBP21.34■■□□□ 1.01
SCARB1-206ENST00000539320 ZNF451Q9Y4E5 1061 aa21.34■■□□□ 1.01
SCARB1-206ENST00000539320 PCDHGB7Q9Y5F8 929 aa21.34■■□□□ 1.01
SCARB1-206ENST00000539320 ESR1P03372 595 aa21.33■■□□□ 1.01
SCARB1-206ENST00000539320 CD63P08962 238 aa21.33■■□□□ 1.01
SCARB1-206ENST00000539320 ATP5DP30049 168 aa21.33■■□□□ 1.01
SCARB1-206ENST00000539320 GCGRP47871 477 aa21.33■■□□□ 1.01
SCARB1-206ENST00000539320 MLLT10P55197 1068 aa21.33■■□□□ 1.01
SCARB1-206ENST00000539320 ADARP55265 1226 aaKnown RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms