RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 MYO9AB2RTY4 2548 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 CITO14578 2027 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 SPTAN1Q13813 2472 aaKnown RBP5.37□□□□□ -1.55
CLIP1-207ENST00000536634 LRRK2Q5S007 2527 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 CEP192Q8TEP8 1941 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 PLXND1Q9Y4D7 1925 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 MYO18AQ92614 2054 aaKnown RBP5.37□□□□□ -1.55
CLIP1-207ENST00000536634 TYW5A2RUC4 315 aaKnown RBP5.37□□□□□ -1.55
CLIP1-207ENST00000536634 LRRIQ4A6NIV6 560 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 HSPB2A8KAH6 182 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 H0Y626 953 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 TRDMT1O14717 391 aaKnown RBP5.37□□□□□ -1.55
CLIP1-207ENST00000536634 ACOT8O14734 319 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 TRIM16O95361 564 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 ZBTB11O95625 1053 aaPredicted RBP5.37□□□□□ -1.55
CLIP1-207ENST00000536634 POLBP06746 335 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 OR4Q2P0C623 313 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 PTGER3P43115 390 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 DHPSP49366 369 aaPredicted RBP5.37□□□□□ -1.55
CLIP1-207ENST00000536634 ST3GAL1Q11201 340 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 DMC1Q14565 340 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 HSPB2Q16082 182 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 ITPRIPL2Q3MIP1 535 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 TPGS2Q68CL5 300 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 MOXD1Q6UVY6 613 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 CCNI2Q6ZMN8 369 aaPredicted RBP5.37□□□□□ -1.55
CLIP1-207ENST00000536634 CREB3L2Q70SY1 520 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 MARCH9Q86YJ5 346 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 DCP1BQ8IZD4 617 aaKnown RBP5.37□□□□□ -1.55
CLIP1-207ENST00000536634 FRMD1Q8N878 549 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 CCDC148Q8NFR7 591 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 C18orf25Q96B23 403 aaPredicted RBP5.37□□□□□ -1.55
CLIP1-207ENST00000536634 MAELQ96JY0 434 aaKnown RBP5.37□□□□□ -1.55
CLIP1-207ENST00000536634 ZMAT2Q96NC0 199 aaKnown RBP5.37□□□□□ -1.55
CLIP1-207ENST00000536634 FNBP1Q96RU3 617 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 FIZ1Q96SL8 496 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 KIFC3Q9BVG8 833 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 GPR88Q9GZN0 384 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 RWDD1Q9H446 243 aaPredicted RBP5.37□□□□□ -1.55
CLIP1-207ENST00000536634 C6orf106Q9H6K1 298 aaPredicted RBP5.37□□□□□ -1.55
CLIP1-207ENST00000536634 SNTG1Q9NSN8 517 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 RRN3Q9NYV6 651 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 CTNNAL1Q9UBT7 734 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 CCL26Q9Y258 94 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 KNTC1P50748 2209 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 CSMD1Q96PZ7 3565 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 UTP20O75691 2785 aaKnown RBP5.37□□□□□ -1.55
CLIP1-207ENST00000536634 TSC2P49815 1807 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 ANK1P16157 1881 aa5.37□□□□□ -1.55
CLIP1-207ENST00000536634 CABIN1Q9Y6J0 2220 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 NOTCH2Q04721 2471 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 SMIM28A0A1B0GU29 152 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 TRAPPC3O43617 180 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 USO1O60763 962 aaKnown RBP5.36□□□□□ -1.55
CLIP1-207ENST00000536634 DKC1O60832 514 aaKnown RBP eCLIP5.36□□□□□ -1.55
CLIP1-207ENST00000536634 SERPINI2O75830 405 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 RGS11O94810 467 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 SLITRK3O94933 977 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 CD59P13987 128 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 GABRR2P28476 465 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 PGM1P36871 562 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 ART1P52961 327 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 CLDN2P57739 230 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 NLRP5P59047 1200 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 SEC61A1P61619 476 aaKnown RBP5.36□□□□□ -1.55
CLIP1-207ENST00000536634 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.36□□□□□ -1.55
CLIP1-207ENST00000536634 TRAF2Q12933 501 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 PRPF4BQ13523 1007 aaKnown RBP5.36□□□□□ -1.55
CLIP1-207ENST00000536634 RUNX3Q13761 415 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 NFIL3Q16649 462 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 IZUMO4Q1ZYL8 232 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 ESCO2Q56NI9 601 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 DCAF6Q58WW2 860 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 C9orf57Q5W0N0 161 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 ZNF280DQ6N043 979 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 SLC22A25Q6T423 547 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 C18orf65Q6ZTR6 163 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 OTUD6AQ7L8S5 288 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 C16orf82Q7Z2V1 217 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 HAUS6Q7Z4H7 955 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 SFTPA2Q8IWL1 248 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 AADATQ8N5Z0 425 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 TSTD1Q8NFU3 115 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 RLN3Q8WXF3 142 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 SLC26A6Q9BXS9 759 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 GPR63Q9BZJ6 419 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 GKN1Q9NS71 199 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 PRMT7Q9NVM4 692 aaPredicted RBP5.36□□□□□ -1.55
CLIP1-207ENST00000536634 IL1RAPL1Q9NZN1 696 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 OR6C3Q9NZP0 311 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 TBX20Q9UMR3 447 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 PCDHGB1Q9Y5G3 927 aa5.36□□□□□ -1.55
CLIP1-207ENST00000536634 PRSS44E7EML9 344 aa5.35□□□□□ -1.55
CLIP1-207ENST00000536634 SH3BP5O60239 455 aa5.35□□□□□ -1.55
CLIP1-207ENST00000536634 SLC2A4P14672 509 aa5.35□□□□□ -1.55
CLIP1-207ENST00000536634 ZNF8P17098 575 aaPredicted RBP5.35□□□□□ -1.55
CLIP1-207ENST00000536634 PIGAP37287 484 aa5.35□□□□□ -1.55
CLIP1-207ENST00000536634 RPL3P39023 403 aaKnown RBP5.35□□□□□ -1.55
CLIP1-207ENST00000536634 EFNA5P52803 228 aa5.35□□□□□ -1.55
CLIP1-207ENST00000536634 OSTNP61366 133 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms