RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 ICKQ9UPZ9 632 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 ASF1AQ9Y294 204 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 VPS9D1Q9Y2B5 631 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 PIKFYVEQ9Y2I7 2098 aa12.02□□□□□ -0.48
PRKDC-207ENST00000536483 MED13Q9UHV7 2174 aa12.02□□□□□ -0.48
PRKDC-207ENST00000536483 C2orf74A8MZ97 194 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 SMAPO00193 183 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 KDM1AO60341 852 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 CPNE3O75131 537 aaKnown RBP12.02□□□□□ -0.49
PRKDC-207ENST00000536483 NDUFS3O75489 264 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 USP1O94782 785 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 S1PR4O95977 384 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 APOA4P06727 396 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 PAMP19021 973 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 VPS41P49754 854 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 GPS2Q13227 327 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 PTK6Q13882 451 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 GRB7Q14451 532 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 CTSL3PQ5NE16 218 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 TMTC4Q5T4D3 741 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 PRAMEF17Q5VTA0 474 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 NEPROQ6NW34 567 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 FBXO38Q6PIJ6 1188 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 UNC5AQ6ZN44 842 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 CENPUQ71F23 418 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 PCGF5Q86SE9 256 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 LDB1Q86U70 411 aaPredicted RBP12.02□□□□□ -0.49
PRKDC-207ENST00000536483 HOOK3Q86VS8 718 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 TMEM126BQ8IUX1 230 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 VRK3Q8IV63 474 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 AGGF1Q8N302 714 aaeCLIP12.02□□□□□ -0.49
PRKDC-207ENST00000536483 SLC38A9Q8NBW4 561 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 LKAAEAR1Q8TD35 194 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 TRAPPC9Q96Q05 1148 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 CHST8Q9H2A9 424 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 MLXIPLQ9NP71 852 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 PLEKHB1Q9UF11 243 aaPredicted RBP12.02□□□□□ -0.49
PRKDC-207ENST00000536483 PCDHGA9Q9Y5G4 932 aaKnown RBP12.02□□□□□ -0.49
PRKDC-207ENST00000536483 MRFAP1Q9Y605 127 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 SAR1BQ9Y6B6 198 aa12.02□□□□□ -0.49
PRKDC-207ENST00000536483 IQCF5A8MTL0 148 aa12.01□□□□□ -0.49
PRKDC-207ENST00000536483 DNALI1O14645 258 aaPredicted RBP12.01□□□□□ -0.49
PRKDC-207ENST00000536483 RPN2P04844 631 aa12.01□□□□□ -0.49
PRKDC-207ENST00000536483 GNG11P61952 73 aa12.01□□□□□ -0.49
PRKDC-207ENST00000536483 HSPA14Q0VDF9 509 aa12.01□□□□□ -0.49
PRKDC-207ENST00000536483 PRKG2Q13237 762 aa12.01□□□□□ -0.49
PRKDC-207ENST00000536483 KIR2DS3Q14952 304 aa12.01□□□□□ -0.49
PRKDC-207ENST00000536483 SYTL3Q4VX76 610 aa12.01□□□□□ -0.49
PRKDC-207ENST00000536483 ZNF789Q5FWF6 425 aa12.01□□□□□ -0.49
PRKDC-207ENST00000536483 PTRHD1Q6GMV3 140 aaKnown RBP12.01□□□□□ -0.49
PRKDC-207ENST00000536483 LCN10Q6JVE6 187 aa12.01□□□□□ -0.49
PRKDC-207ENST00000536483 SPESP1Q6UW49 350 aa12.01□□□□□ -0.49
PRKDC-207ENST00000536483 CES3Q6UWW8 571 aa12.01□□□□□ -0.49
PRKDC-207ENST00000536483 HMGCLL1Q8TB92 370 aa12.01□□□□□ -0.49
PRKDC-207ENST00000536483 PPM1MQ96MI6 270 aa12.01□□□□□ -0.49
PRKDC-207ENST00000536483 OR2A14Q96R47 310 aa12.01□□□□□ -0.49
PRKDC-207ENST00000536483 NAPGQ99747 312 aaPredicted RBP12.01□□□□□ -0.49
PRKDC-207ENST00000536483 NAT9Q9BTE0 207 aa12.01□□□□□ -0.49
PRKDC-207ENST00000536483 HGH1Q9BTY7 390 aa12.01□□□□□ -0.49
PRKDC-207ENST00000536483 DDX47Q9H0S4 455 aaKnown RBP12.01□□□□□ -0.49
PRKDC-207ENST00000536483 ACTR10Q9NZ32 417 aa12.01□□□□□ -0.49
PRKDC-207ENST00000536483 SAMD15Q9P1V8 674 aa12.01□□□□□ -0.49
PRKDC-207ENST00000536483 PYCARDQ9ULZ3 195 aa12.01□□□□□ -0.49
PRKDC-207ENST00000536483 MAP4K5Q9Y4K4 846 aa12.01□□□□□ -0.49
PRKDC-207ENST00000536483 FAM169AQ9Y6X4 670 aa12.01□□□□□ -0.49
PRKDC-207ENST00000536483 SLC9B1P1A6NJY1 282 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 H3BMH7 237 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 CCDC188H7C350 402 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 MEN1O00255 615 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 FANCGO15287 622 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 PRICKLE3O43900 615 aaPredicted RBP12□□□□□ -0.49
PRKDC-207ENST00000536483 SEMA7AO75326 666 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 SORBS2O94875 1100 aaKnown RBP12□□□□□ -0.49
PRKDC-207ENST00000536483 FKBP9O95302 570 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 MATN4O95460 622 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 KLK3P07288 261 aaPredicted RBP12□□□□□ -0.49
PRKDC-207ENST00000536483 CHRM5P08912 532 aaPredicted RBP12□□□□□ -0.49
PRKDC-207ENST00000536483 ST6GAL1P15907 406 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 CDH3P22223 829 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 PKLRP30613 574 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 GABRA4P48169 554 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 RAB28P51157 221 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 DHX34Q14147 1143 aaKnown RBP12□□□□□ -0.49
PRKDC-207ENST00000536483 ESPL1Q14674 2120 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 BRD3Q15059 726 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 TMED2Q15363 201 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 KCTD19Q17RG1 926 aaPredicted RBP12□□□□□ -0.49
PRKDC-207ENST00000536483 SLC5A12Q1EHB4 618 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 FAM69BQ5VUD6 431 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 IZUMO3Q5VZ72 239 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 NAPRTQ6XQN6 538 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 OTOAQ7RTW8 1153 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 DCUN1D3Q8IWE4 304 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 KRT222Q8N1A0 295 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 ENDOVQ8N8Q3 282 aaKnown RBP12□□□□□ -0.49
PRKDC-207ENST00000536483 CALML6Q8TD86 181 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 ADAMTS17Q8TE56 1095 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 NRTNQ99748 197 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 XKR8Q9H6D3 395 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 SOHLH2Q9NX45 425 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms