RNA–Protein interactions for RNA: ENST00000536445.5

POLE-209, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-209	ENST00000536445		H3BMM5	538 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	SNX4	O95219	450 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	SPN	P16150	400 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	PSMB9	P28065	219 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	P2RX3	P56373	397 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	SLC35A2	P78381	396 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	PAGE3	Q5JUK9	113 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	KIAA0930	Q6ICG6	404 aa	Predicted RBP	13.72	□□□□□ -0.21
POLE-209	ENST00000536445	ESRP1	Q6NXG1	681 aa	Known RBP	13.72	□□□□□ -0.21
POLE-209	ENST00000536445	ADGRD2	Q7Z7M1	963 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	METTL4	Q8N3J2	472 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	TMEM74	Q96NL1	305 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	CLPB	Q9H078	707 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	ASAH2	Q9NR71	780 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	DDX28	Q9NUL7	540 aa	Known RBP	13.72	□□□□□ -0.21
POLE-209	ENST00000536445	SCN3B	Q9NY72	215 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	ORC6	Q9Y5N6	252 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	PLXNA3	P51805	1871 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	LOC105371267	A0A1B0GV96	52 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	EFCAB9	A8MZ26	197 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	RFXAP	O00287	272 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	CDK14	O94921	469 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	IGLV3-27	P01718	113 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	PCNA	P12004	261 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	TSPAN8	P19075	237 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	HTR3A	P46098	478 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	OR4D2	P58180	307 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	POU6F1	Q14863	301 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	NPTX1	Q15818	432 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	COLEC12	Q5KU26	742 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	ERAP2	Q6P179	960 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	DTWD1	Q8N5C7	304 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	MRPS31	Q92665	395 aa	Known RBP	13.72	□□□□□ -0.21
POLE-209	ENST00000536445	ISG20	Q96AZ6	181 aa	Known RBP	13.72	□□□□□ -0.21
POLE-209	ENST00000536445	C1orf74	Q96LT6	269 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	TBL1Y	Q9BQ87	522 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	DCSTAMP	Q9H295	470 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	MID1IP1	Q9NPA3	183 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	UBP1	Q9NZI7	540 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	OPTC	Q9UBM4	332 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	MAU2	Q9Y6X3	613 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	HSPE1-MOB4	S4R3N1	261 aa		13.72	□□□□□ -0.21
POLE-209	ENST00000536445	METTL15	A6NJ78	407 aa		13.71	□□□□□ -0.21
POLE-209	ENST00000536445	DFFA	O00273	331 aa		13.71	□□□□□ -0.21
POLE-209	ENST00000536445	NRG2	O14511	850 aa	Predicted RBP	13.71	□□□□□ -0.21
POLE-209	ENST00000536445	NOBOX	O60393	691 aa		13.71	□□□□□ -0.21
POLE-209	ENST00000536445	ICMT	O60725	284 aa		13.71	□□□□□ -0.21
POLE-209	ENST00000536445	C1R	P00736	705 aa		13.71	□□□□□ -0.21
POLE-209	ENST00000536445	CST1	P01037	141 aa		13.71	□□□□□ -0.21
POLE-209	ENST00000536445	CYBB	P04839	570 aa		13.71	□□□□□ -0.21
POLE-209	ENST00000536445	S100A5	P33763	92 aa		13.71	□□□□□ -0.21
POLE-209	ENST00000536445	SOX11	P35716	441 aa		13.71	□□□□□ -0.21
POLE-209	ENST00000536445	DDOST	P39656	456 aa		13.71	□□□□□ -0.21
POLE-209	ENST00000536445	CLK3	P49761	638 aa	Known RBP	13.71	□□□□□ -0.21
POLE-209	ENST00000536445	ZNF135	P52742	658 aa	Predicted RBP	13.71	□□□□□ -0.21
POLE-209	ENST00000536445	RING1	Q06587	406 aa		13.71	□□□□□ -0.21
POLE-209	ENST00000536445	DGCR6	Q14129	220 aa		13.71	□□□□□ -0.21
POLE-209	ENST00000536445	RBM20	Q5T481	1227 aa	Known RBP	13.71	□□□□□ -0.21
POLE-209	ENST00000536445	FBXL22	Q6P050	247 aa		13.71	□□□□□ -0.21
POLE-209	ENST00000536445	RAB44	Q7Z6P3	723 aa	Predicted RBP	13.71	□□□□□ -0.21
POLE-209	ENST00000536445	EID3	Q8N140	333 aa		13.71	□□□□□ -0.21
POLE-209	ENST00000536445	AMER2	Q8N7J2	671 aa		13.71	□□□□□ -0.21
POLE-209	ENST00000536445	FIG4	Q92562	907 aa		13.71	□□□□□ -0.21
POLE-209	ENST00000536445	RPRD1A	Q96P16	312 aa	Predicted RBP	13.71	□□□□□ -0.21
POLE-209	ENST00000536445	PRKD2	Q9BZL6	878 aa		13.71	□□□□□ -0.21
POLE-209	ENST00000536445	CATSPERB	Q9H7T0	1116 aa		13.71	□□□□□ -0.21
POLE-209	ENST00000536445	LTB4R2	Q9NPC1	389 aa		13.71	□□□□□ -0.21
POLE-209	ENST00000536445	TREX1	Q9NSU2	369 aa		13.71	□□□□□ -0.21
POLE-209	ENST00000536445	NDFIP2	Q9NV92	336 aa		13.71	□□□□□ -0.21
POLE-209	ENST00000536445	AIG1	Q9NVV5	245 aa		13.71	□□□□□ -0.21
POLE-209	ENST00000536445	GIMAP2	Q9UG22	337 aa		13.71	□□□□□ -0.21
POLE-209	ENST00000536445	HCFC2	Q9Y5Z7	792 aa		13.71	□□□□□ -0.21
POLE-209	ENST00000536445	COL4A4	P53420	1690 aa	Predicted RBP	13.71	□□□□□ -0.21
POLE-209	ENST00000536445	GREB1	Q4ZG55	1949 aa		13.71	□□□□□ -0.22
POLE-209	ENST00000536445	BCKDK	O14874	412 aa		13.7	□□□□□ -0.22
POLE-209	ENST00000536445	ZW10	O43264	779 aa		13.7	□□□□□ -0.22
POLE-209	ENST00000536445	XPNPEP2	O43895	674 aa		13.7	□□□□□ -0.22
POLE-209	ENST00000536445	CACNG3	O60359	315 aa		13.7	□□□□□ -0.22
POLE-209	ENST00000536445	SLC22A3	O75751	556 aa		13.7	□□□□□ -0.22
POLE-209	ENST00000536445	CKM	P06732	381 aa		13.7	□□□□□ -0.22
POLE-209	ENST00000536445	ITGAM	P11215	1152 aa		13.7	□□□□□ -0.22
POLE-209	ENST00000536445	M6PR	P20645	277 aa		13.7	□□□□□ -0.22
POLE-209	ENST00000536445	CD6	P30203	668 aa		13.7	□□□□□ -0.22
POLE-209	ENST00000536445	CORO1A	P31146	461 aa	Known RBP	13.7	□□□□□ -0.22
POLE-209	ENST00000536445	OR2B6	P58173	313 aa		13.7	□□□□□ -0.22
POLE-209	ENST00000536445	IL5RA	Q01344	420 aa		13.7	□□□□□ -0.22
POLE-209	ENST00000536445	NADSYN1	Q6IA69	706 aa		13.7	□□□□□ -0.22
POLE-209	ENST00000536445	GDPD3	Q7L5L3	318 aa		13.7	□□□□□ -0.22
POLE-209	ENST00000536445	CIR1	Q86X95	450 aa	Predicted RBP	13.7	□□□□□ -0.22
POLE-209	ENST00000536445	TMC8	Q8IU68	726 aa		13.7	□□□□□ -0.22
POLE-209	ENST00000536445	GALNT12	Q8IXK2	581 aa		13.7	□□□□□ -0.22
POLE-209	ENST00000536445	CFAP52	Q8N1V2	620 aa		13.7	□□□□□ -0.22
POLE-209	ENST00000536445	IGSF8	Q969P0	613 aa		13.7	□□□□□ -0.22
POLE-209	ENST00000536445	WBP2	Q969T9	261 aa		13.7	□□□□□ -0.22
POLE-209	ENST00000536445	CCDC115	Q96NT0	180 aa		13.7	□□□□□ -0.22
POLE-209	ENST00000536445	ALG9	Q9H6U8	611 aa		13.7	□□□□□ -0.22
POLE-209	ENST00000536445	ERVK-18	Q9QC07	812 aa		13.7	□□□□□ -0.22
POLE-209	ENST00000536445	WBP11	Q9Y2W2	641 aa	Known RBP	13.7	□□□□□ -0.22
POLE-209	ENST00000536445	PTGDR2	Q9Y5Y4	395 aa		13.7	□□□□□ -0.22
POLE-209	ENST00000536445		A0A1W2PQ67	120 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms