RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 PTRH2Q9Y3E5 179 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 COPG1Q9Y678 874 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 PKDREJQ9NTG1 2253 aa10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 MIF4GDA9UHW6 222 aaKnown RBP10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 E2F3O00716 465 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 SOCS6O14544 535 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 DSCR3O14972 297 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 METTL18O95568 372 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 RPN2P04844 631 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 STSP08842 583 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 OR56A5P0C7T3 313 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 TNNT1P13805 278 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 EDN3P14138 238 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 CD9P21926 228 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 ITGA3P26006 1051 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 PRKG2Q13237 762 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 LLGL1Q15334 1064 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 NR6A1Q15406 480 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 SPA17Q15506 151 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 NKG7Q16617 165 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 ZC3H12BQ5HYM0 836 aaKnown RBP10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 PRAMEF13Q5VWM6 474 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 DARS2Q6PI48 645 aaKnown RBP10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 KIRREL2Q6UWL6 708 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 CISD2Q8N5K1 135 aaKnown RBP10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 LMNTD1Q8N9Z9 388 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 OR2L8Q8NGY9 312 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 PRR7Q8TB68 274 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 FAR1Q8WVX9 515 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 MRFAP1L1Q96HT8 127 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 NDC1Q9BTX1 674 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 HGH1Q9BTY7 390 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 FRMD8P1Q9BZ68 369 aaPredicted RBP10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 SLC7A5P2Q9GIP4 190 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 FAM96AQ9H5X1 160 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 XKR8Q9H6D3 395 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 C10orf88Q9H8K7 445 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 CASS4Q9NQ75 786 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 SEMA3GQ9NS98 782 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 NDOR1Q9UHB4 597 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 GPN3Q9UHW5 284 aaPredicted RBP10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 ENTPD4Q9Y227 616 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 NTNG1Q9Y2I2 539 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 MRFAP1Q9Y605 127 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 HS3ST3B1Q9Y662 390 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 EPN1Q9Y6I3 576 aaPredicted RBP10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 PRSS21Q9Y6M0 314 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 F8P00451 2351 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 C2CD3Q4AC94 2353 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 TACC2O95359 2948 aa10.77□□□□□ -0.69
CLSTN3-206ENST00000535668 PCNX1Q96RV3 2341 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 PDZD2O15018 2839 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 HEATR9A2RTY3 570 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 RCCD1A6NED2 376 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 A6NL46 340 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 F5H423 210 aaPredicted RBP10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 KRT86O43790 486 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 PHF2O75151 1096 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 FDXRP22570 491 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 MSNP26038 577 aaKnown RBP10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 OTX2P32243 289 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 CYLC1P35663 651 aaPredicted RBP10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 PPARGP37231 505 aaPredicted RBP10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 CDH17Q12864 832 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 GRM7Q14831 915 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 TLR1Q15399 786 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 INAQ16352 499 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 FAM214AQ32MH5 1076 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 AGAP7PQ5VUJ5 663 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 MLIPQ5VWP3 458 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 ATG9BQ674R7 924 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 HIST2H2BCQ6DN03 193 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 COX15Q7KZN9 410 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 HOOK3Q86VS8 718 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 MCATQ8IVS2 390 aaKnown RBP10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 DCUN1D3Q8IWE4 304 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 MPP5Q8N3R9 675 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 ZNF655Q8N720 491 aaPredicted RBP10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 ELMO1Q92556 727 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 RELTQ969Z4 430 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 AGAP4Q96P64 663 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 TTC1Q99614 292 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 RAB11FIP5Q9BXF6 653 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 MFRPQ9BY79 579 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 ZBTB20Q9HC78 741 aaPredicted RBP10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 SLC6A20Q9NP91 592 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 TXLNGQ9NUQ3 528 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 INTS7Q9NVH2 962 aaKnown RBP10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 SMARCAL1Q9NZC9 954 aa10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 DHCR7Q9UBM7 475 aaKnown RBP10.76□□□□□ -0.69
CLSTN3-206ENST00000535668 CCDC162PA2VCL2 907 aa10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 GOLGA6L9A6NEM1 432 aa10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 CCL22O00626 93 aa10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 CTSBP07858 339 aa10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 CYC1P08574 325 aa10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 PRSS56P0CW18 603 aa10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 MAGP20916 626 aa10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 RPS3P23396 243 aaKnown RBP eCLIP10.75□□□□□ -0.698e-7■■■■□ 20.8
CLSTN3-206ENST00000535668 ADRA1DP25100 572 aa10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 AOAHP28039 575 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms