RNA–Protein interactions for RNA: ENST00000535458.6

KPNB1-202, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2 BASIC

Gene KPNB1, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-202ENST00000535458 ZNF846Q147U1 533 aa8.65□□□□□ -1.02
KPNB1-202ENST00000535458 SKIV2LQ15477 1246 aaKnown RBP8.65□□□□□ -1.02
KPNB1-202ENST00000535458 PHKG1Q16816 387 aa8.65□□□□□ -1.02
KPNB1-202ENST00000535458 GTDC1Q4AE62 458 aa8.65□□□□□ -1.02
KPNB1-202ENST00000535458 C6orf141Q5SZD1 244 aa8.65□□□□□ -1.02
KPNB1-202ENST00000535458 ADGRF1Q5T601 910 aa8.65□□□□□ -1.02
KPNB1-202ENST00000535458 CERS6Q6ZMG9 384 aa8.65□□□□□ -1.02
KPNB1-202ENST00000535458 CCDC103Q8IW40 242 aa8.65□□□□□ -1.02
KPNB1-202ENST00000535458 SYTL1Q8IYJ3 562 aa8.65□□□□□ -1.02
KPNB1-202ENST00000535458 MICU2Q8IYU8 434 aa8.65□□□□□ -1.02
KPNB1-202ENST00000535458 POC5Q8NA72 575 aa8.65□□□□□ -1.02
KPNB1-202ENST00000535458 CLHC1Q8NHS4 586 aa8.65□□□□□ -1.02
KPNB1-202ENST00000535458 STARD8Q92502 1023 aa8.65□□□□□ -1.02
KPNB1-202ENST00000535458 HDAC2Q92769 488 aaKnown RBP8.65□□□□□ -1.02
KPNB1-202ENST00000535458 PLD4Q96BZ4 506 aa8.65□□□□□ -1.02
KPNB1-202ENST00000535458 SH3YL1Q96HL8 342 aaPredicted RBP8.65□□□□□ -1.02
KPNB1-202ENST00000535458 RDH12Q96NR8 316 aa8.65□□□□□ -1.02
KPNB1-202ENST00000535458 CD244Q9BZW8 370 aa8.65□□□□□ -1.02
KPNB1-202ENST00000535458 ASB8Q9H765 288 aa8.65□□□□□ -1.02
KPNB1-202ENST00000535458 ZNF490Q9ULM2 529 aaPredicted RBP8.65□□□□□ -1.02
KPNB1-202ENST00000535458 C16orf96A6NNT2 1141 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 MYO1GB0I1T2 1018 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 FZD6O60353 706 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 ULK1O75385 1050 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 MFN2O95140 757 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 SEC24AO95486 1093 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 PRKAR2AP13861 404 aaKnown RBP8.65□□□□□ -1.03
KPNB1-202ENST00000535458 GSTM2P28161 218 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 GNPDA1P46926 289 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 ACLYP53396 1101 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 PPP2R2BQ00005 443 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 KCNAB2Q13303 367 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 GTF2H3Q13889 308 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 RUNDC3AQ59EK9 446 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 CACHD1Q5VU97 1274 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 THOC7Q6I9Y2 204 aaKnown RBP8.65□□□□□ -1.03
KPNB1-202ENST00000535458 SUSD1Q6UWL2 747 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 GCNT7Q6ZNI0 430 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 PLD3Q8IV08 490 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 RGL4Q8IZJ4 473 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 CARNMT1Q8N4J0 409 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 CHDHQ8NE62 594 aaPredicted RBP8.65□□□□□ -1.03
KPNB1-202ENST00000535458 C2orf15Q8WU43 125 aaKnown RBP8.65□□□□□ -1.03
KPNB1-202ENST00000535458 MTFMTQ96DP5 389 aaKnown RBP8.65□□□□□ -1.03
KPNB1-202ENST00000535458 CASD1Q96PB1 797 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 RNF38Q9H0F5 515 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 CWH43Q9H720 699 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 LRTM1Q9HBL6 345 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 MAGEE1Q9HCI5 957 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 RASSF1Q9NS23 344 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 PDE10AQ9Y233 779 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 PCDHB7Q9Y5E2 793 aa8.65□□□□□ -1.03
KPNB1-202ENST00000535458 TMEM88BA6NKF7 163 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 LOC730098B7Z3J9 87 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 GAPDHSO14556 408 aaPredicted RBP8.64□□□□□ -1.03
KPNB1-202ENST00000535458 AXIN1O15169 862 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 SCELO95171 688 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 KRT75O95678 551 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 IL6P05231 212 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 BMP1P13497 986 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 ELNP15502 786 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 RPL17P18621 184 aaKnown RBP8.64□□□□□ -1.03
KPNB1-202ENST00000535458 DGKAP23743 735 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 HOXD11P31277 338 aaPredicted RBP8.64□□□□□ -1.03
KPNB1-202ENST00000535458 CD47Q08722 323 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 EPS8Q12929 822 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 MADCAM1Q13477 382 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 PON2Q15165 354 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 CTU2Q2VPK5 515 aaKnown RBP8.64□□□□□ -1.03
KPNB1-202ENST00000535458 GTF2IRD2BQ6EKJ0 949 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 ANKS3Q6ZW76 656 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 TMEM179BQ7Z7N9 219 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 GTF2IRD2Q86UP8 949 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 RBFAQ8N0V3 343 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 SVOPLQ8N434 492 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 CHCHD4Q8N4Q1 142 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 GLB1L3Q8NCI6 653 aaPredicted RBP8.64□□□□□ -1.03
KPNB1-202ENST00000535458 FBXO22Q8NEZ5 403 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 PJA1Q8NG27 643 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 OR6K2Q8NGY2 324 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 RPL3LQ92901 407 aaKnown RBP8.64□□□□□ -1.03
KPNB1-202ENST00000535458 OR52E6Q96RD3 313 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 SH3GL1Q99961 368 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 RBM4BQ9BQ04 359 aaKnown RBP8.64□□□□□ -1.03
KPNB1-202ENST00000535458 TTPALQ9BTX7 342 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 RBM4Q9BWF3 364 aaKnown RBP8.64□□□□□ -1.03
KPNB1-202ENST00000535458 TM6SF2Q9BZW4 377 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 ABCG8Q9H221 673 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 SLC6A13Q9NSD5 602 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 USE1Q9NZ43 259 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 TMED5Q9Y3A6 229 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 A8MV72 311 aaPredicted RBP8.64□□□□□ -1.03
KPNB1-202ENST00000535458 HTR1AP08908 422 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 RPS3P23396 243 aaKnown RBP eCLIP8.64□□□□□ -1.035e-7■■□□□ 13.1
KPNB1-202ENST00000535458 CLK1P49759 484 aaKnown RBP8.64□□□□□ -1.03
KPNB1-202ENST00000535458 IFITM3Q01628 133 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 SYT16Q17RD7 645 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 INAVAQ3KP66 663 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 ARMC12Q5T9G4 340 aa8.64□□□□□ -1.03
KPNB1-202ENST00000535458 ARMCX6Q7L4S7 300 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms