RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 FAM198BQ6UWH4 519 aa9.71□□□□□ -0.86
CLSTN3-203ENST00000534830 PPP1R21Q6ZMI0 780 aa9.71□□□□□ -0.86
CLSTN3-203ENST00000534830 VRK3Q8IV63 474 aa9.71□□□□□ -0.86
CLSTN3-203ENST00000534830 SLC22A15Q8IZD6 547 aa9.71□□□□□ -0.86
CLSTN3-203ENST00000534830 C19orf47Q8N9M1 422 aaKnown RBP9.71□□□□□ -0.86
CLSTN3-203ENST00000534830 LKAAEAR1Q8TD35 194 aa9.71□□□□□ -0.86
CLSTN3-203ENST00000534830 MR1Q95460 341 aa9.71□□□□□ -0.86
CLSTN3-203ENST00000534830 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.71□□□□□ -0.86
CLSTN3-203ENST00000534830 SNRNP40Q96DI7 357 aaKnown RBP9.71□□□□□ -0.86
CLSTN3-203ENST00000534830 EIF2B3Q9NR50 452 aaKnown RBP9.71□□□□□ -0.86
CLSTN3-203ENST00000534830 CHRAC1Q9NRG0 131 aa9.71□□□□□ -0.86
CLSTN3-203ENST00000534830 TREX1Q9NSU2 369 aa9.71□□□□□ -0.86
CLSTN3-203ENST00000534830 ASF1BQ9NVP2 202 aa9.71□□□□□ -0.86
CLSTN3-203ENST00000534830 SPHK1Q9NYA1 384 aa9.71□□□□□ -0.86
CLSTN3-203ENST00000534830 OR6C2Q9NZP2 312 aa9.71□□□□□ -0.86
CLSTN3-203ENST00000534830 SERTAD3Q9UJW9 196 aa9.71□□□□□ -0.86
CLSTN3-203ENST00000534830 TCFL5Q9UL49 500 aa9.71□□□□□ -0.86
CLSTN3-203ENST00000534830 ZKSCAN5Q9Y2L8 839 aa9.71□□□□□ -0.86
CLSTN3-203ENST00000534830 PDZD2O15018 2839 aa9.71□□□□□ -0.86
CLSTN3-203ENST00000534830 NUP210LQ5VU65 1888 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 IQCF5A8MTL0 148 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 E7EQ34 232 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 ZNF749O43361 778 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 GAS8O95995 478 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 APRTP07741 180 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 AOAHP28039 575 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 GCGRP47871 477 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 ITGA1P56199 1179 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 GRB7Q14451 532 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 SLC5A12Q1EHB4 618 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 FASTKD1Q53R41 847 aaKnown RBP9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 DNAJC21Q5F1R6 531 aaKnown RBP9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 C4orf22Q6V702 233 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 SYTL1Q8IYJ3 562 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 DNAJC22Q8N4W6 341 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 CISD2Q8N5K1 135 aaKnown RBP9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 ZBTB2Q8N680 514 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 RBMXL3Q8N7X1 1067 aaKnown RBP9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 ENDOVQ8N8Q3 282 aaKnown RBP9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 LINC01555Q8NAE3 123 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 PNPLA2Q96AD5 504 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 CLIP3Q96DZ5 547 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 TTC1Q99614 292 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 DPH2Q9BQC3 489 aaPredicted RBP9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 KLHL25Q9H0H3 589 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 P2RY12Q9H244 342 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 ACTR5Q9H9F9 607 aaPredicted RBP9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 ENAMQ9NRM1 1142 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 MARCH4Q9P2E8 410 aaPredicted RBP9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 G3BP2Q9UN86 482 aaKnown RBP9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 PCDHGB7Q9Y5F8 929 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 NF1P21359 2839 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 HEATR5BQ9P2D3 2071 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 CCDC168Q8NDH2 2452 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 MTORP42345 2549 aa9.7□□□□□ -0.86
CLSTN3-203ENST00000534830 FBN3Q75N90 2809 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 A0A0J9YY10 115 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 PRSS44E7EML9 344 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 E7EVH7 732 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 F8W8V4 182 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 PRMT5O14744 637 aaPredicted RBP9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 PRICKLE3O43900 615 aaPredicted RBP9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 DIAPH2O60879 1101 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 KLF7O75840 302 aaPredicted RBP9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 CTSBP07858 339 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 HBQ1P09105 142 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 CYP2A7P20853 494 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 RPS3P23396 243 aaKnown RBP eCLIP9.69□□□□□ -0.869e-7■■■□□ 18.6
CLSTN3-203ENST00000534830 ARNTP27540 789 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 PKLRP30613 574 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 PPARGP37231 505 aaPredicted RBP9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 KCNJ1P48048 391 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 NPY2RP49146 381 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 PER3P56645 1201 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 PRAMEP78395 509 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 MDC1Q14676 2089 aaKnown RBP9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 KIR2DS3Q14952 304 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 FAM69BQ5VUD6 431 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 RHBDD2Q6NTF9 364 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 LDB1Q86U70 411 aaPredicted RBP9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 TRIM73Q86UV7 250 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 LRRC8AQ8IWT6 810 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 IQCKQ8N0W5 287 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 CCDC89Q8N998 374 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 PPHLN1Q8NEY8 458 aaKnown RBP9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 FDCSPQ8NFU4 85 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 OR6P1Q8NGX9 317 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 ASZ1Q8WWH4 475 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 DOCK10Q96BY6 2186 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 POM121Q96HA1 1249 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 GBP5Q96PP8 586 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 KIFC1Q9BW19 673 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 SPRTNQ9H040 489 aaPredicted RBP9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 MRM3Q9HC36 420 aaKnown RBP9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 CATSPERZQ9NTU4 200 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 PLAGL1Q9UM63 463 aa9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 TDRKHQ9Y2W6 561 aaKnown RBP9.69□□□□□ -0.86
CLSTN3-203ENST00000534830 POLEQ07864 2286 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 TCRBV7S3A2A0A539 114 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 A6NL46 340 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms