RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 SF3B4Q15427 424 aaKnown RBP eCLIP6.68□□□□□ -1.34
RAG1-203ENST00000534663 TAF1CQ15572 869 aaPredicted RBP6.68□□□□□ -1.34
RAG1-203ENST00000534663 TAF1AQ15573 450 aaPredicted RBP6.68□□□□□ -1.34
RAG1-203ENST00000534663 CTF1Q16619 201 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 SETMARQ53H47 684 aaPredicted RBP6.68□□□□□ -1.34
RAG1-203ENST00000534663 XKR7Q5GH72 579 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 C9orf131Q5VYM1 1079 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 PLEKHG7Q6ZR37 379 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 B3GNT8Q7Z7M8 397 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 C11orf74Q86VG3 221 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 SERPINA9Q86WD7 417 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 C10orf111Q8N326 155 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 SVOPLQ8N434 492 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 TTC30BQ8N4P2 665 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 KCNS3Q9BQ31 491 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 COPS4Q9BT78 406 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 RNF167Q9H6Y7 350 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 KAT8Q9H7Z6 458 aaKnown RBP6.68□□□□□ -1.34
RAG1-203ENST00000534663 RMND5AQ9H871 391 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 SLC52A3Q9NQ40 469 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 C14orf119Q9NWQ9 140 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 IMPAD1Q9NX62 359 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 SLC25A37Q9NYZ2 338 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 FAM32AQ9Y421 112 aaKnown RBP6.68□□□□□ -1.34
RAG1-203ENST00000534663 ARIH1Q9Y4X5 557 aaPredicted RBP6.68□□□□□ -1.34
RAG1-203ENST00000534663 KNL1Q8NG31 2342 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 OR7A17O14581 309 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 TNFRSF10BO14763 440 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 PRAMEF12O95522 483 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 KRT6AP02538 564 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 APOA1P02647 267 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 KRT6BP04259 564 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 BCKDHAP12694 445 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 TACR1P25103 407 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 HOXC13P31276 330 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 KRT6CP48668 564 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 SLC11A2P49281 568 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 RAB15P59190 212 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 RPS14P62263 151 aaKnown RBP6.68□□□□□ -1.34
RAG1-203ENST00000534663 PPP2R2BQ00005 443 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 PURAQ00577 322 aaKnown RBP6.68□□□□□ -1.34
RAG1-203ENST00000534663 MED22Q15528 200 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 CARD16Q5EG05 197 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 VARS2Q5ST30 1063 aaKnown RBP6.68□□□□□ -1.34
RAG1-203ENST00000534663 SUSD1Q6UWL2 747 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 TMC5Q6UXY8 1006 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 SPATC1Q76KD6 591 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 SCAIQ8N9R8 606 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 MUL1Q969V5 352 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 PYURFQ96I23 114 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 ZFYVE19Q96K21 471 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 TSEN34Q9BSV6 310 aaKnown RBP6.68□□□□□ -1.34
RAG1-203ENST00000534663 CEP44Q9C0F1 390 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 AASDHPPTQ9NRN7 309 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 VNN3Q9NY84 501 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 GPRC5BQ9NZH0 403 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 SH3BP4Q9P0V3 963 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 SLCO3A1Q9UIG8 710 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 OGDHLQ9ULD0 1010 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 DLGAP4Q9Y2H0 992 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 PAPPA2Q9BXP8 1791 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 PNMA8CA0A1B0GUJ8 204 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 IFRD1O00458 451 aaPredicted RBP6.68□□□□□ -1.34
RAG1-203ENST00000534663 CCNKO75909 580 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 MYCP01106 439 aaPredicted RBP6.68□□□□□ -1.34
RAG1-203ENST00000534663 ALOX5P09917 674 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 HIST1H2AGP0C0S8 130 aaPredicted RBP6.68□□□□□ -1.34
RAG1-203ENST00000534663 COX7A2P14406 83 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 HIST1H2ADP20671 130 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 HTR7P34969 479 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 CDKN2CP42773 168 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 ZFP36L2P47974 494 aaKnown RBP6.68□□□□□ -1.34
RAG1-203ENST00000534663 YBEYP58557 167 aaPredicted RBP6.68□□□□□ -1.34
RAG1-203ENST00000534663 LRRC74AQ0VAA2 488 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 MAP2K5Q13163 448 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 OR2T5Q6IEZ7 315 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 BEND5Q7L4P6 421 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 ARMC8Q8IUR7 673 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 SYT12Q8IV01 421 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 SVOPQ8N4V2 548 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 PAPD5Q8NDF8 572 aaKnown RBP6.68□□□□□ -1.34
RAG1-203ENST00000534663 GPR156Q8NFN8 814 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 OR2T29Q8NH02 315 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 HIST1H2AHQ96KK5 128 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 C1orf74Q96LT6 269 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 MTERF1Q99551 399 aaKnown RBP6.68□□□□□ -1.34
RAG1-203ENST00000534663 HIST1H2AJQ99878 128 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 H2AFJQ9BTM1 129 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 MROQ9BYG7 248 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 DSN1Q9H410 356 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 PRDM5Q9NQX1 630 aaPredicted RBP6.68□□□□□ -1.34
RAG1-203ENST00000534663 NUDT4Q9NZJ9 180 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 RAPGEFL1Q9UHV5 662 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 PCDHGA10Q9Y5H3 936 aa6.68□□□□□ -1.34
RAG1-203ENST00000534663 SOBPA7XYQ1 873 aa6.67□□□□□ -1.34
RAG1-203ENST00000534663 MTX2O75431 263 aa6.67□□□□□ -1.34
RAG1-203ENST00000534663 STK16O75716 305 aa6.67□□□□□ -1.34
RAG1-203ENST00000534663 IL6P05231 212 aa6.67□□□□□ -1.34
RAG1-203ENST00000534663 BMP1P13497 986 aa6.67□□□□□ -1.34
RAG1-203ENST00000534663 GJA8P48165 433 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms