RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 C2orf74A8MZ97 194 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 ISM1B1AKI9 464 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 TMX2-CTNND1H3BSU7 103 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 GFYI3L273 518 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 RIPK2O43353 540 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 ITGA2BP08514 1039 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 CBSLP0DN79 551 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 FOLR1P15328 257 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 CD9P21926 228 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 PHBP35232 272 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 CBSP35520 551 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 RGS4P49798 205 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 TSTA3Q13630 321 aaPredicted RBP13.55□□□□□ -0.24
VPS11-205ENST00000534551 USP10Q14694 798 aaKnown RBP13.55□□□□□ -0.24
VPS11-205ENST00000534551 TBC1D25Q3MII6 688 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 SPESP1Q6UW49 350 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 SUSD1Q6UWL2 747 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 CEP128Q6ZU80 1094 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 CYS1Q717R9 158 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 OR9A1PQ8NGU1 263 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 OR2L8Q8NGY9 312 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 ASB11Q8WXH4 323 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 KLHL6Q8WZ60 621 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 RAD51AP1Q96B01 352 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 SLC46A1Q96NT5 459 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 FUT8Q9BYC5 575 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 ABCF3Q9NUQ8 709 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 SOHLH2Q9NX45 425 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 OR6C2Q9NZP2 312 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 PDE10AQ9Y233 779 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 RAXQ9Y2V3 346 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 B3GALT1Q9Y5Z6 326 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 USP24Q9UPU5 2620 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 A0A1W2PPV9 198 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 POC1B-GALNT4F8VUJ3 575 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 CDC7O00311 574 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 HCRTR1O43613 425 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 DXOO77932 396 aaKnown RBP13.54□□□□□ -0.24
VPS11-205ENST00000534551 TIAF1O95411 115 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 SLC16A8O95907 504 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 ERGP11308 486 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 NELFEP18615 380 aaKnown RBP13.54□□□□□ -0.24
VPS11-205ENST00000534551 TNFRSF8P28908 595 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 IMPA1P29218 277 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 RBMS1P29558 406 aaKnown RBP13.54□□□□□ -0.24
VPS11-205ENST00000534551 SLC5A2P31639 672 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 CCNFP41002 786 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 PMS2P54278 862 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 IL2P60568 153 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 FOXM1Q08050 763 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 SRSF6Q13247 344 aaKnown RBP13.54□□□□□ -0.24
VPS11-205ENST00000534551 NAB1Q13506 487 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 NAA30Q147X3 362 aaPredicted RBP13.54□□□□□ -0.24
VPS11-205ENST00000534551 GPR19Q15760 415 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 ZKSCAN8Q15776 578 aaPredicted RBP13.54□□□□□ -0.24
VPS11-205ENST00000534551 ZIC1Q15915 447 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 GRTP1Q5TC63 336 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 MROH9Q5TGP6 573 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 SBSNQ6UWP8 590 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 UBXN4Q92575 508 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 SLC41A2Q96JW4 573 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 DCBLD2Q96PD2 775 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 OR6C1Q96RD1 312 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 CD180Q99467 661 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 PAFAH2Q99487 392 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 ACAT2Q9BWD1 397 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 PITPNM3Q9BZ71 974 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 GPAMQ9HCL2 828 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 SLC39A1Q9NY26 324 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 UTP6Q9NYH9 597 aaKnown RBP13.54□□□□□ -0.24
VPS11-205ENST00000534551 AKAP7Q9P0M2 348 aaPredicted RBP13.54□□□□□ -0.24
VPS11-205ENST00000534551 SPATA7Q9P0W8 599 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 SEMA5BQ9P283 1151 aa13.54□□□□□ -0.24
VPS11-205ENST00000534551 A0A0J9YY10 115 aa13.53□□□□□ -0.24
VPS11-205ENST00000534551 EIF3FO00303 357 aaPredicted RBP13.53□□□□□ -0.24
VPS11-205ENST00000534551 CTSBP07858 339 aa13.53□□□□□ -0.24
VPS11-205ENST00000534551 ZNF28P17035 718 aa13.53□□□□□ -0.24
VPS11-205ENST00000534551 MAGP20916 626 aa13.53□□□□□ -0.24
VPS11-205ENST00000534551 MAP4P27816 1152 aaKnown RBP13.53□□□□□ -0.24
VPS11-205ENST00000534551 GCAP28676 217 aa13.53□□□□□ -0.24
VPS11-205ENST00000534551 SKIV2L2P42285 1042 aaKnown RBP13.53□□□□□ -0.24
VPS11-205ENST00000534551 SLC12A2P55011 1212 aa13.53□□□□□ -0.24
VPS11-205ENST00000534551 IRF9Q00978 393 aa13.53□□□□□ -0.24
VPS11-205ENST00000534551 POU4F1Q01851 419 aa13.53□□□□□ -0.24
VPS11-205ENST00000534551 TSNQ15631 228 aaKnown RBP13.53□□□□□ -0.24
VPS11-205ENST00000534551 CYP2A13Q16696 494 aa13.53□□□□□ -0.24
VPS11-205ENST00000534551 ERCC6LQ2NKX8 1250 aa13.53□□□□□ -0.24
VPS11-205ENST00000534551 KIAA1614Q5VZ46 1190 aa13.53□□□□□ -0.24
VPS11-205ENST00000534551 TTC23LQ6PF05 361 aa13.53□□□□□ -0.24
VPS11-205ENST00000534551 CLEC14AQ86T13 490 aa13.53□□□□□ -0.24
VPS11-205ENST00000534551 ZFAND4Q86XD8 727 aa13.53□□□□□ -0.24
VPS11-205ENST00000534551 PROSER1Q86XN7 944 aa13.53□□□□□ -0.24
VPS11-205ENST00000534551 C19orf47Q8N9M1 422 aaKnown RBP13.53□□□□□ -0.24
VPS11-205ENST00000534551 ZNF480Q8WV37 535 aa13.53□□□□□ -0.24
VPS11-205ENST00000534551 SLC44A1Q8WWI5 657 aa13.53□□□□□ -0.24
VPS11-205ENST00000534551 TRAPPC9Q96Q05 1148 aa13.53□□□□□ -0.24
VPS11-205ENST00000534551 CYTH2Q99418 400 aa13.53□□□□□ -0.24
VPS11-205ENST00000534551 MIPEPQ99797 713 aa13.53□□□□□ -0.24
VPS11-205ENST00000534551 RAB11FIP5Q9BXF6 653 aa13.53□□□□□ -0.24
VPS11-205ENST00000534551 FAM60AQ9NP50 221 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms