RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 GTF3C6Q969F1 213 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 FAM149B1Q96BN6 582 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 CMTM3Q96MX0 182 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 CATSPER2Q96P56 530 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 GPR174Q9BXC1 333 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 SPAG4Q9NPE6 437 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 ASAH2Q9NR71 780 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 PXMP2Q9NR77 195 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 ABI3Q9P2A4 366 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 LAMP3Q9UQV4 416 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 POLEQ07864 2286 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 ARID1BQ8NFD5 2236 aaPredicted RBP4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 IGKV6D-41A0A0C4DH26 115 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 MYO1GB0I1T2 1018 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 BTBD18B2RXH4 712 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 RHODO00212 210 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 PRRG1O14668 218 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 DFNA5O60443 496 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 PROP1O75360 226 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 LATS1O95835 1130 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 TFP02787 698 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 VTNP04004 478 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 ADRB2P07550 413 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 KRT19P08727 400 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 CD63P08962 238 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 YWHAQP27348 245 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 RYKP34925 604 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 KRT20P35900 424 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 ACVRL1P37023 503 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 CLCNKBP51801 687 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 IFI35P80217 286 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 KLF10Q13118 480 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 BECN1Q14457 450 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 VEPH1Q14D04 833 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 SHBQ15464 509 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 DPCR1Q3MIW9 517 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 ENTPD8Q5MY95 495 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 ZNF782Q6ZMW2 699 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 ZNF517Q6ZMY9 492 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 ZNF66Q6ZN08 573 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 FAM83HQ6ZRV2 1179 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 CEP57Q86XR8 500 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 ARHGAP12Q8IWW6 846 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 DDIASQ8IXT1 998 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 CCDC13Q8IYE1 715 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 ADGRF4Q8IZF3 695 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 ADGRF2Q8IZF7 708 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 SEMA6DQ8NFY4 1073 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 APOBEC4Q8WW27 367 aaKnown RBP4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 SMARCE1Q969G3 411 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 ERLEC1Q96DZ1 483 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 MMABQ96EY8 250 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 CALML4Q96GE6 196 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 H2AFJQ9BTM1 129 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 NUF2Q9BZD4 464 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 SPHK2Q9NRA0 654 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 PLK2Q9NYY3 685 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 ING1Q9UK53 422 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 DMRT1Q9Y5R6 373 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 SNX8Q9Y5X2 465 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 DOCK9Q9BZ29 2069 aa4.47□□□□□ -1.69
ECHDC1-223ENST00000534442 ANK3Q12955 4377 aaKnown RBP4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 TP53BP1Q12888 1972 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 COL27A1Q8IZC6 1860 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 LINC01548A6NM66 108 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 A8MZ25 164 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 EIF3CLB5ME19 914 aaKnown RBP4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 USP17L23D6RBM5 183 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 EBAG9O00559 213 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 PRRG2O14669 202 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 P4HA2O15460 535 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 TSPAN9O75954 239 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 BEST1O76090 585 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 IRF1P10914 325 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 CDAP32320 146 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 CIITAP33076 1130 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 GABRB2P47870 512 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 CXCR3P49682 368 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 NIPAL4Q0D2K0 466 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 EPS8Q12929 822 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 CSTF3Q12996 717 aaKnown RBP4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 STIM1Q13586 685 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 NEDD9Q14511 834 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 FGFBP1Q14512 234 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 ZNF268Q14587 947 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 CRYMQ14894 314 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 WDR43Q15061 677 aaKnown RBP eCLIP4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 HIST2H2ACQ16777 129 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 LRRC8EQ6NSJ5 796 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 FAM57BQ71RH2 274 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 CHST9Q7L1S5 443 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 KDELC2Q7Z4H8 507 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 IGFN1Q86VF2 1251 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 ZFAND4Q86XD8 727 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 TDRPQ86YL5 185 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 CEP97Q8IW35 865 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 ELMOD1Q8N336 334 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 C17orf53Q8N3J3 647 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 RASSF8Q8NHQ8 419 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 EME1Q96AY2 570 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms