RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 CD9P21926 228 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 FNTAP49354 379 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 PMS2P54278 862 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 EIF3BP55884 814 aaKnown RBP13.55□□□□□ -0.24
SF3B2-215ENST00000534307 SARNPP82979 210 aaKnown RBP13.55□□□□□ -0.24
SF3B2-215ENST00000534307 IL10RAQ13651 578 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 UGT8Q16880 541 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 ANKRD20A4Q4UJ75 823 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 CLEC18BQ6UXF7 455 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 OTOAQ7RTW8 1153 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 SYTL1Q8IYJ3 562 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 DNAJC22Q8N4W6 341 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 NAT8LQ8N9F0 302 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 LMNTD1Q8N9Z9 388 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 CLEC18CQ8NCF0 446 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 OR2L8Q8NGY9 312 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 C9orf43Q8TAL5 461 aaPredicted RBP13.55□□□□□ -0.24
SF3B2-215ENST00000534307 ADAMTS17Q8TE56 1095 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 SEC14L1Q92503 715 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 ABHD17AQ96GS6 310 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 XAB2Q9HCS7 855 aaKnown RBP13.55□□□□□ -0.24
SF3B2-215ENST00000534307 SNX12Q9UMY4 172 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 FARSAQ9Y285 508 aaKnown RBP13.55□□□□□ -0.24
SF3B2-215ENST00000534307 CELSR2Q9HCU4 2923 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 CSMD1Q96PZ7 3565 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 RP1L1Q8IWN7 2480 aaPredicted RBP13.54□□□□□ -0.24
SF3B2-215ENST00000534307 SDR42E2A6NKP2 422 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 E7EQ34 232 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 H3BMM5 538 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 RASGRF2O14827 1237 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 ZNF185O15231 689 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 ZSCAN12O43309 604 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 ZNF749O43361 778 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 NIPSNAP2O75323 286 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 MATN4O95460 622 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 C1orf105O95561 183 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 ESR1P03372 595 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 PAMP19021 973 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 ATP5DP30049 168 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 RPS15P62841 145 aaKnown RBP13.54□□□□□ -0.24
SF3B2-215ENST00000534307 DEFB110Q30KQ9 67 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 PTCHD3Q3KNS1 767 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 NEPROQ6NW34 567 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 SDCCAG8Q86SQ7 713 aaPredicted RBP13.54□□□□□ -0.24
SF3B2-215ENST00000534307 APLFQ8IW19 511 aaPredicted RBP13.54□□□□□ -0.24
SF3B2-215ENST00000534307 FAM20CQ8IXL6 584 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 CFAP61Q8NHU2 1237 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 THAP4Q8WY91 577 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 CLIP3Q96DZ5 547 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 IL17FQ96PD4 163 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 DPH2Q9BQC3 489 aaPredicted RBP13.54□□□□□ -0.24
SF3B2-215ENST00000534307 NLNQ9BYT8 704 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 IL1RAPL1Q9NZN1 696 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 CIDEBQ9UHD4 219 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 RUVBL2Q9Y230 463 aaKnown RBP13.54□□□□□ -0.24
SF3B2-215ENST00000534307 MED16Q9Y2X0 877 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 NFS1Q9Y697 457 aa13.54□□□□□ -0.24
SF3B2-215ENST00000534307 PCSK5Q92824 1860 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 MAGEB16A2A368 324 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 ISM1B1AKI9 464 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 GOLGA8MH3BSY2 632 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 OR2B3O76000 313 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 S1PR4O95977 384 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 MAGP20916 626 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 FMO4P31512 558 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 GCGRP47871 477 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 DHX34Q14147 1143 aaKnown RBP13.53□□□□□ -0.24
SF3B2-215ENST00000534307 CCSMST1Q4G0I0 132 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 RNASEH2BQ5TBB1 312 aaKnown RBP13.53□□□□□ -0.24
SF3B2-215ENST00000534307 RHBDD2Q6NTF9 364 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 CASC4Q6P4E1 433 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 HOOK3Q86VS8 718 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 OTUD6BQ8N6M0 293 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 ENDOVQ8N8Q3 282 aaKnown RBP13.53□□□□□ -0.24
SF3B2-215ENST00000534307 HMGCLL1Q8TB92 370 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 DENND1AQ8TEH3 1009 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 SLCO2A1Q92959 643 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 ZNF669Q96BR6 464 aaPredicted RBP13.53□□□□□ -0.24
SF3B2-215ENST00000534307 SIGLEC10Q96LC7 697 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 GBP5Q96PP8 586 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 SPRTNQ9H040 489 aaPredicted RBP13.53□□□□□ -0.24
SF3B2-215ENST00000534307 ZNF71Q9NQZ8 489 aaPredicted RBP13.53□□□□□ -0.24
SF3B2-215ENST00000534307 ENAMQ9NRM1 1142 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 INTS10Q9NVR2 710 aaKnown RBP13.53□□□□□ -0.24
SF3B2-215ENST00000534307 TRMT1Q9NXH9 659 aaKnown RBP13.53□□□□□ -0.24
SF3B2-215ENST00000534307 SAMD15Q9P1V8 674 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 GALPQ9UBC7 116 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 TCFL5Q9UL49 500 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 MAN2B2Q9Y2E5 1009 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 CRYL1Q9Y2S2 319 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 AP1M2Q9Y6Q5 423 aa13.53□□□□□ -0.24
SF3B2-215ENST00000534307 DOPEY1Q5JWR5 2465 aa13.52□□□□□ -0.24
SF3B2-215ENST00000534307 ABCA12Q86UK0 2595 aa13.52□□□□□ -0.24
SF3B2-215ENST00000534307 GOLGA6L10A0A0M3HER8 536 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 KRT87PA6NCN2 255 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 K7EM74 188 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 ZSCAN9O15535 394 aaPredicted RBP13.52□□□□□ -0.25
SF3B2-215ENST00000534307 KIF5CO60282 957 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 RFPL1O75677 317 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 HBQ1P09105 142 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms