RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 RP1L1Q8IWN7 2480 aaPredicted RBP10.06□□□□□ -0.8
CAPN1-225ENST00000533704 GOLGA6L10A0A0M3HER8 536 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 CTAGE9A4FU28 777 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 SDR42E2A6NKP2 422 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 E5RI56 91 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 K7EM74 188 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 ZNF185O15231 689 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 PHF2O75151 1096 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 SLCO2B1O94956 709 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 WISP1O95388 367 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 CTSBP07858 339 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 HBQ1P09105 142 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 CBSLP0DN79 551 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 CD9P21926 228 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 RPS3P23396 243 aaKnown RBP eCLIP10.06□□□□□ -0.8
CAPN1-225ENST00000533704 RORAP35398 523 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 CBSP35520 551 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 PTGIRP43119 386 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 PMS2P54278 862 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 KCNC4Q03721 635 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 TLE1Q04724 770 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 TSTA3Q13630 321 aaPredicted RBP10.06□□□□□ -0.8
CAPN1-225ENST00000533704 THOC5Q13769 683 aaKnown RBP10.06□□□□□ -0.8
CAPN1-225ENST00000533704 DHX34Q14147 1143 aaKnown RBP10.06□□□□□ -0.8
CAPN1-225ENST00000533704 SLC9A5Q14940 896 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 PPP1R7Q15435 360 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 SF1Q15637 639 aaKnown RBP10.06□□□□□ -0.8
CAPN1-225ENST00000533704 SLC5A12Q1EHB4 618 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 CCSMST1Q4G0I0 132 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 RNF187Q5TA31 235 aaPredicted RBP10.06□□□□□ -0.8
CAPN1-225ENST00000533704 MLIPQ5VWP3 458 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 IZUMO3Q5VZ72 239 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 ZNF470Q6ECI4 717 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 NEPROQ6NW34 567 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 FAM198BQ6UWH4 519 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 RAB42Q8N4Z0 105 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 LINC01555Q8NAE3 123 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 OR2L8Q8NGY9 312 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 GRK7Q8WTQ7 553 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 SEC14L1Q92503 715 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 LPGAT1Q92604 370 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 RAD51AP1Q96B01 352 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 FOPNLQ96NB1 174 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 NLNQ9BYT8 704 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 TRIM55Q9BYV6 548 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 XAB2Q9HCS7 855 aaKnown RBP10.06□□□□□ -0.8
CAPN1-225ENST00000533704 ACSS2Q9NR19 701 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 TXLNGQ9NUQ3 528 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 DHCR7Q9UBM7 475 aaKnown RBP10.06□□□□□ -0.8
CAPN1-225ENST00000533704 GPN3Q9UHW5 284 aaPredicted RBP10.06□□□□□ -0.8
CAPN1-225ENST00000533704 TCFL5Q9UL49 500 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 PLCL2Q9UPR0 1127 aa10.06□□□□□ -0.8
CAPN1-225ENST00000533704 NUP210LQ5VU65 1888 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 H3BMM5 538 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 RASGRF2O14827 1237 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 ZSCAN9O15535 394 aaPredicted RBP10.05□□□□□ -0.8
CAPN1-225ENST00000533704 S1PR4O95977 384 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 ESR1P03372 595 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 RAB40ALP0C0E4 278 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 MSL3P1P0C860 447 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 PKMP14618 531 aaKnown RBP10.05□□□□□ -0.8
CAPN1-225ENST00000533704 OGNP20774 298 aaKnown RBP10.05□□□□□ -0.8
CAPN1-225ENST00000533704 PSMB5P28074 263 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 OTX2P32243 289 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 GRIA3P42263 894 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 MAGEA6P43360 314 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 CCL11P51671 97 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 GRB7Q14451 532 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 NCF4Q15080 339 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 CYP1B1Q16678 543 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 TYSND1Q2T9J0 566 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 ANKRD20A4Q4UJ75 823 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 ACSBG2Q5FVE4 666 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 ZNF517Q6ZMY9 492 aaPredicted RBP10.05□□□□□ -0.8
CAPN1-225ENST00000533704 ASB18Q6ZVZ8 466 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 CENPUQ71F23 418 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 DNAJC22Q8N4W6 341 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 ZBTB2Q8N680 514 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 MCUQ8NE86 351 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 THAP4Q8WY91 577 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 SLC22A18Q96BI1 424 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 BIRC8Q96P09 236 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 SERPINB12Q96P63 405 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 TCF12Q99081 682 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 NDC1Q9BTX1 674 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 RAB11FIP5Q9BXF6 653 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 EPN3Q9H201 632 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 CCDC68Q9H2F9 335 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 KCNF1Q9H3M0 494 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 CLMPQ9H6B4 373 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 FBXO6Q9NRD1 293 aaPredicted RBP10.05□□□□□ -0.8
CAPN1-225ENST00000533704 INTS7Q9NVH2 962 aaKnown RBP10.05□□□□□ -0.8
CAPN1-225ENST00000533704 EURLQ9NYK6 297 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 GALPQ9UBC7 116 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 NDOR1Q9UHB4 597 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 ASIC3Q9UHC3 531 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 MRFAP1Q9Y605 127 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 AP1M2Q9Y6Q5 423 aa10.05□□□□□ -0.8
CAPN1-225ENST00000533704 DOCK10Q96BY6 2186 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 FAM237BA0A1B0GVD1 139 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms