RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 SERPINB8P50452 374 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 ZFP36L1Q07352 338 aaKnown RBP12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 SP140Q13342 867 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 PHKG1Q16816 387 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 WDR74Q6RFH5 385 aaPredicted RBP12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 SBSNQ6UWP8 590 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 UBE2R2Q712K3 238 aaPredicted RBP12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 AMIGO1Q86WK6 493 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 SLITRK4Q8IW52 837 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 ADGRF3Q8IZF5 1079 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 SPATA6LQ8N4H0 392 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 LINC01555Q8NAE3 123 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 EPS8L3Q8TE67 593 aaKnown RBP12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 LCN9Q8WX39 176 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 GFM1Q96RP9 751 aaKnown RBP12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 PKP4Q99569 1192 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 ABCG4Q9H172 646 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 PPCSQ9HAB8 311 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 RDH14Q9HBH5 336 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 IGSF5Q9NSI5 407 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 TMEM9Q9P0T7 183 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 PSMC3IPQ9P2W1 217 aaPredicted RBP12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 PDE10AQ9Y233 779 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 PTPRBP23467 1997 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 OR5K3A6NET4 321 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 CDC7O00311 574 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 RASGRF2O14827 1237 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 DUX1O43812 170 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 SMNDC1O75940 238 aaKnown RBP eCLIP12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 KRT37O76014 449 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 MT-CO3P00414 261 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 CATP04040 527 aaKnown RBP12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 CCDC166P0CW27 439 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 CD1DP15813 335 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 PEX19P40855 299 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 SLC26A3P40879 764 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 CAPZBP47756 277 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 PPP1CAP62136 330 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 IRF9Q00978 393 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 PLCL1Q15111 1095 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 PPP1R3AQ16821 1122 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 HES3Q5TGS1 186 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 TMEM71Q6P5X7 295 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 TAOK1Q7L7X3 1001 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 KIRREL3Q8IZU9 778 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 CENPLQ8N0S6 344 aaPredicted RBP12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 IQCKQ8N0W5 287 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 CYP4X1Q8N118 509 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 DCBLD1Q8N8Z6 715 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 LMNTD1Q8N9Z9 388 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 OR9A1PQ8NGU1 263 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 FLVCR1-AS1Q8TAF5 88 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 HMGCLL1Q8TB92 370 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 IL17FQ96PD4 163 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 TMEM109Q9BVC6 243 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 SRMSQ9H3Y6 488 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 PARVBQ9HBI1 364 aa12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 NOVA2Q9UNW9 492 aaKnown RBP12.33□□□□□ -0.44
RPUSD4-208ENST00000533628 MN1Q10571 1320 aaPredicted RBP12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 UNC13CQ8NB66 2214 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 A0A096LPK6 155 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 OR6C74A6NCV1 312 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 BTN3A1O00481 513 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 ZBTB14O43829 449 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 PRICKLE3O43900 615 aaPredicted RBP12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 AMD1P17707 334 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 KCNA4P22459 653 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 TYK2P29597 1187 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 PEBP1P30086 187 aaKnown RBP12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 SHMT2P34897 504 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 RAB28P51157 221 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 GFERP55789 205 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 SPIDRQ14159 915 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 CYP2A13Q16696 494 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 TTMPQ5BVD1 217 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 RBM44Q6ZP01 1051 aaKnown RBP12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 TMPRSS7Q7RTY8 843 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 DGLUCYQ7Z3D6 616 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 B3GNT8Q7Z7M8 397 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 TMPRSS12Q86WS5 348 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 LRRC56Q8IYG6 542 aaPredicted RBP12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 CHCHD4Q8N4Q1 142 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 OR4D9Q8NGE8 314 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 OR2L8Q8NGY9 312 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 NCSTNQ92542 709 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 MTBPQ96DY7 904 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 AHCYL2Q96HN2 611 aaKnown RBP12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 GPR78Q96P69 363 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 DPYSL5Q9BPU6 564 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 SEMA6CQ9H3T2 930 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 HRASLS2Q9NWW9 162 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 OR6C2Q9NZP2 312 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 SPATA7Q9P0W8 599 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 ACOT9Q9Y305 439 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 SPTBN4Q9H254 2564 aa12.32□□□□□ -0.44
RPUSD4-208ENST00000533628 A0A087X1B8 175 aa12.31□□□□□ -0.44
RPUSD4-208ENST00000533628 IGHV5-10-1A0A0J9YXX1 117 aa12.31□□□□□ -0.44
RPUSD4-208ENST00000533628 NPEPPSL1A6NEC2 478 aa12.31□□□□□ -0.44
RPUSD4-208ENST00000533628 TOP3BO95985 862 aaKnown RBP12.31□□□□□ -0.44
RPUSD4-208ENST00000533628 FAM107AO95990 144 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms