RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 RAD51AP1Q96B01 352 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 PBKQ96KB5 322 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 IL17FQ96PD4 163 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 TCF12Q99081 682 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 DHRS4Q9BTZ2 278 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 RAB11FIP5Q9BXF6 653 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 SAMD15Q9P1V8 674 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 G3BP2Q9UN86 482 aaKnown RBP14.88□□□□□ -0.03
CPSF1-211ENST00000533492 SRPK3Q9UPE1 567 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 JRKLQ9Y4A0 524 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 BSNQ9UPA5 3926 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.87□□□□□ -0.03
CPSF1-211ENST00000533492 GOLGA8KD6RF30 607 aa14.87□□□□□ -0.03
CPSF1-211ENST00000533492 H3BMM5 538 aa14.87□□□□□ -0.03
CPSF1-211ENST00000533492 GOLGA8TH3BQL2 631 aa14.87□□□□□ -0.03
CPSF1-211ENST00000533492 RASGRF2O14827 1237 aa14.87□□□□□ -0.03
CPSF1-211ENST00000533492 HCRTR1O43613 425 aa14.87□□□□□ -0.03
CPSF1-211ENST00000533492 AVILO75366 819 aa14.87□□□□□ -0.03
CPSF1-211ENST00000533492 CD63P08962 238 aa14.87□□□□□ -0.03
CPSF1-211ENST00000533492 CBSLP0DN79 551 aa14.87□□□□□ -0.03
CPSF1-211ENST00000533492 CHRM3P20309 590 aa14.87□□□□□ -0.03
CPSF1-211ENST00000533492 CBSP35520 551 aa14.87□□□□□ -0.03
CPSF1-211ENST00000533492 GABRA4P48169 554 aa14.87□□□□□ -0.03
CPSF1-211ENST00000533492 PGDP52209 483 aa14.87□□□□□ -0.03
CPSF1-211ENST00000533492 DCDP81605 110 aaKnown RBP14.87□□□□□ -0.03
CPSF1-211ENST00000533492 IGFBP7Q16270 282 aa14.87□□□□□ -0.03
CPSF1-211ENST00000533492 RAB43Q86YS6 212 aa14.87□□□□□ -0.03
CPSF1-211ENST00000533492 LMNTD1Q8N9Z9 388 aa14.87□□□□□ -0.03
CPSF1-211ENST00000533492 LINC01555Q8NAE3 123 aa14.87□□□□□ -0.03
CPSF1-211ENST00000533492 OR2L8Q8NGY9 312 aa14.87□□□□□ -0.03
CPSF1-211ENST00000533492 PROKR1Q8TCW9 393 aa14.87□□□□□ -0.03
CPSF1-211ENST00000533492 MAGEC3Q8TD91 643 aa14.87□□□□□ -0.03
CPSF1-211ENST00000533492 ADAMTS17Q8TE56 1095 aa14.87□□□□□ -0.03
CPSF1-211ENST00000533492 NAP1L3Q99457 506 aaPredicted RBP14.87□□□□□ -0.03
CPSF1-211ENST00000533492 NDC1Q9BTX1 674 aa14.87□□□□□ -0.03
CPSF1-211ENST00000533492 EURLQ9NYK6 297 aa14.87□□□□□ -0.03
CPSF1-211ENST00000533492 IFT80Q9P2H3 777 aaPredicted RBP14.87□□□□□ -0.03
CPSF1-211ENST00000533492 DHCR7Q9UBM7 475 aaKnown RBP14.87□□□□□ -0.03
CPSF1-211ENST00000533492 NDOR1Q9UHB4 597 aa14.87□□□□□ -0.03
CPSF1-211ENST00000533492 KLHL20Q9Y2M5 609 aa14.87□□□□□ -0.03
CPSF1-211ENST00000533492 SNRNP200O75643 2136 aaKnown RBP14.87□□□□□ -0.03
CPSF1-211ENST00000533492 MED13Q9UHV7 2174 aa14.86□□□□□ -0.03
CPSF1-211ENST00000533492 H3BMH7 237 aa14.86□□□□□ -0.03
CPSF1-211ENST00000533492 ESR1P03372 595 aa14.86□□□□□ -0.03
CPSF1-211ENST00000533492 ALAS2P22557 587 aa14.86□□□□□ -0.03
CPSF1-211ENST00000533492 ARNTP27540 789 aa14.86□□□□□ -0.03
CPSF1-211ENST00000533492 OTX2P32243 289 aa14.86□□□□□ -0.03
CPSF1-211ENST00000533492 CCNFP41002 786 aa14.86□□□□□ -0.03
CPSF1-211ENST00000533492 RRADP55042 308 aa14.86□□□□□ -0.03
CPSF1-211ENST00000533492 GRB7Q14451 532 aa14.86□□□□□ -0.03
CPSF1-211ENST00000533492 KCNJ11Q14654 390 aa14.86□□□□□ -0.03
CPSF1-211ENST00000533492 ZC3H12BQ5HYM0 836 aaKnown RBP14.86□□□□□ -0.03
CPSF1-211ENST00000533492 ARMC3Q5W041 872 aa14.86□□□□□ -0.03
CPSF1-211ENST00000533492 ZNF385CQ66K41 422 aaPredicted RBP14.86□□□□□ -0.03
CPSF1-211ENST00000533492 KIAA0930Q6ICG6 404 aaPredicted RBP14.86□□□□□ -0.03
CPSF1-211ENST00000533492 CNSTQ6PJW8 725 aa14.86□□□□□ -0.03
CPSF1-211ENST00000533492 FIGLAQ6QHK4 219 aa14.86□□□□□ -0.03
CPSF1-211ENST00000533492 MED25Q71SY5 747 aa14.86□□□□□ -0.03
CPSF1-211ENST00000533492 MCATQ8IVS2 390 aaKnown RBP14.86□□□□□ -0.03
CPSF1-211ENST00000533492 TMEM102Q8N9M5 508 aaPredicted RBP14.86□□□□□ -0.03
CPSF1-211ENST00000533492 MS4A14Q96JA4 679 aa14.86□□□□□ -0.03
CPSF1-211ENST00000533492 GBP5Q96PP8 586 aa14.86□□□□□ -0.03
CPSF1-211ENST00000533492 MENTQ9BUN1 341 aa14.86□□□□□ -0.03
CPSF1-211ENST00000533492 CRYL1Q9Y2S2 319 aa14.86□□□□□ -0.03
CPSF1-211ENST00000533492 PCDHGA9Q9Y5G4 932 aaKnown RBP14.86□□□□□ -0.03
CPSF1-211ENST00000533492 NFS1Q9Y697 457 aa14.86□□□□□ -0.03
CPSF1-211ENST00000533492 SETXQ7Z333 2677 aaKnown RBP14.85□□□□□ -0.03
CPSF1-211ENST00000533492 MAGEB16A2A368 324 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 SDR42E2A6NKP2 422 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 E5RI56 91 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 ZNF185O15231 689 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 C1orf105O95561 183 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 PDGFAP04085 211 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 CTSBP07858 339 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 OGNP20774 298 aaKnown RBP14.85□□□□□ -0.03
CPSF1-211ENST00000533492 COILP38432 576 aaPredicted RBP14.85□□□□□ -0.03
CPSF1-211ENST00000533492 FOLR3P41439 243 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 GRIA3P42263 894 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 MAGEA6P43360 314 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 BDKRB1P46663 353 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 ARSFP54793 590 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 FOXK1P85037 733 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 DHX34Q14147 1143 aaKnown RBP14.85□□□□□ -0.03
CPSF1-211ENST00000533492 SSPNQ14714 243 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 TYSND1Q2T9J0 566 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 CTSL3PQ5NE16 218 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 NEPROQ6NW34 567 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 TTC27Q6P3X3 843 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 CCDC137Q6PK04 289 aaKnown RBP14.85□□□□□ -0.03
CPSF1-211ENST00000533492 CAND1Q86VP6 1230 aaKnown RBP14.85□□□□□ -0.03
CPSF1-211ENST00000533492 RASGEF1CQ8N431 466 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 ZBTB2Q8N680 514 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 DENND1AQ8TEH3 1009 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 LPGAT1Q92604 370 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 DLG3Q92796 817 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 ZUFSPQ96AP4 578 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 FAM136AQ96C01 138 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 BIRC8Q96P09 236 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 IP6K3Q96PC2 410 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 ASH1LQ9NR48 2969 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms