RNA–Protein interactions for RNA: ENST00000532781.1

ARID1A-208, Transcript of AT-rich interaction domain 1A, human

TSL 1 (best)

Gene ARID1A, Length 2,583 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID1A-208	ENST00000532781	VPS35	Q96QK1	796 aa		13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	ECSIT	Q9BQ95	431 aa		13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	TRIM54	Q9BYV2	358 aa		13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	MKRN2	Q9H000	416 aa	Known RBP	13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	TRPV4	Q9HBA0	871 aa		13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	LRTM1	Q9HBL6	345 aa		13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	FZD3	Q9NPG1	666 aa		13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	FADS3	Q9Y5Q0	445 aa		13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	TRIOBP	Q9H2D6	2365 aa		13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	KCNE1B	A0A087WTH5	132 aa		13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	PABPN1L	A6NDY0	278 aa	Known RBP	13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781		H3BM21	787 aa		13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	GSTM1	P09488	218 aa		13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	RPL10	P27635	214 aa	Known RBP	13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	MAP4	P27816	1152 aa	Known RBP	13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	GCK	P35557	465 aa		13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	GSTM4	Q03013	218 aa		13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	STARD3	Q14849	445 aa		13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	EIF4H	Q15056	248 aa	Known RBP	13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	AMIGO2	Q86SJ2	522 aa		13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	THOC6	Q86W42	341 aa	Known RBP	13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	ZFAND4	Q86XD8	727 aa		13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	PQLC1	Q8N2U9	271 aa		13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	CXorf40A	Q8TE69	158 aa		13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	LRTOMT	Q8WZ04	291 aa		13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	TMEM125	Q96AQ2	219 aa		13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	ELOVL6	Q9H5J4	265 aa		13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	PCDHGB4	Q9UN71	923 aa		13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	PCDHGB5	Q9Y5G0	923 aa		13.62	□□□□□ -0.23
ARID1A-208	ENST00000532781	PLXND1	Q9Y4D7	1925 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	CCDC85C	A6NKD9	419 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	POP7	O75817	140 aa	Known RBP	13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	PAK4	O96013	591 aa	Predicted RBP	13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	UBTFL6	P0CB48	400 aa	Predicted RBP	13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	MPC1L	P0DKB6	136 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	OXTR	P30559	389 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	PRKG2	Q13237	762 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	MAP7D1	Q3KQU3	841 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	PDCD4	Q53EL6	469 aa	Known RBP	13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	XKR6	Q5GH73	641 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	ATAT1	Q5SQI0	421 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	EFL1	Q7Z2Z2	1120 aa	Known RBP	13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	CYP2U1	Q7Z449	544 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	GALNT4	Q8N4A0	578 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	USP7	Q93009	1102 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	AURKB	Q96GD4	344 aa	Predicted RBP	13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	APOLD1	Q96LR9	279 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	IKZF5	Q9H5V7	419 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	HEBP1	Q9NRV9	189 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	DNAJC11	Q9NVH1	559 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	DZANK1	Q9NVP4	752 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	SUCO	Q9UBS9	1254 aa	Known RBP	13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	TRPS1	Q9UHF7	1281 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	NEUROG3	Q9Y4Z2	214 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	EME2	A4GXA9	379 aa	Predicted RBP	13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	FAM149A	A5PLN7	773 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781		K7EQS6	105 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	IFRD1	O00458	451 aa	Predicted RBP	13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	RGS14	O43566	566 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	DFNA5	O60443	496 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	PSIP1	O75475	530 aa	Known RBP	13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	TIPRL	O75663	272 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	ETHE1	O95571	254 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	GSN	P06396	782 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	BCKDHA	P12694	445 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	CLNS1A	P54105	237 aa	Known RBP	13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	ELP6	Q0PNE2	266 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	FGL2	Q14314	439 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	CATSPERE	Q5SY80	951 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	AGBL4	Q5VU57	503 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	ANKRD26P1	Q6NSI1	321 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	NANOGP8	Q6NSW7	305 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	DUS1L	Q6P1R4	473 aa	Known RBP	13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	HDDC3	Q8N4P3	179 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	CANT1	Q8WVQ1	401 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	TRMT61B	Q9BVS5	477 aa	Known RBP	13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	ACAT2	Q9BWD1	397 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	NANOG	Q9H9S0	305 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	RIMS3	Q9UJD0	308 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	PCDHA9	Q9Y5H5	950 aa		13.61	□□□□□ -0.23
ARID1A-208	ENST00000532781	MUC3A	Q02505	3323 aa		13.6	□□□□□ -0.23
ARID1A-208	ENST00000532781	ARNTL	O00327	626 aa		13.6	□□□□□ -0.23
ARID1A-208	ENST00000532781	AKAP10	O43572	662 aa		13.6	□□□□□ -0.23
ARID1A-208	ENST00000532781	EED	O75530	441 aa	Known RBP	13.6	□□□□□ -0.23
ARID1A-208	ENST00000532781	PAPLN	O95428	1278 aa		13.6	□□□□□ -0.23
ARID1A-208	ENST00000532781	GNPDA1	P46926	289 aa		13.6	□□□□□ -0.23
ARID1A-208	ENST00000532781	GSK3B	P49841	420 aa		13.6	□□□□□ -0.23
ARID1A-208	ENST00000532781	PHC1	P78364	1004 aa		13.6	□□□□□ -0.23
ARID1A-208	ENST00000532781	DOC2A	Q14183	400 aa		13.6	□□□□□ -0.23
ARID1A-208	ENST00000532781	KIAA0040	Q15053	153 aa		13.6	□□□□□ -0.23
ARID1A-208	ENST00000532781	CST6	Q15828	149 aa		13.6	□□□□□ -0.23
ARID1A-208	ENST00000532781	WSCD2	Q2TBF2	565 aa		13.6	□□□□□ -0.23
ARID1A-208	ENST00000532781	ZNF658B	Q4V348	819 aa	Predicted RBP	13.6	□□□□□ -0.23
ARID1A-208	ENST00000532781	SAMD4B	Q5PRF9	694 aa	Known RBP	13.6	□□□□□ -0.23
ARID1A-208	ENST00000532781	FAM124A	Q86V42	546 aa		13.6	□□□□□ -0.23
ARID1A-208	ENST00000532781	ROPN1L	Q96C74	230 aa		13.6	□□□□□ -0.23
ARID1A-208	ENST00000532781	PPP1R16A	Q96I34	528 aa		13.6	□□□□□ -0.23
ARID1A-208	ENST00000532781	S1PR5	Q9H228	398 aa		13.6	□□□□□ -0.23
ARID1A-208	ENST00000532781	VAPA	Q9P0L0	249 aa		13.6	□□□□□ -0.23
ARID1A-208	ENST00000532781	AURKC	Q9UQB9	309 aa		13.6	□□□□□ -0.23

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