RNA–Protein interactions for RNA: ENST00000529445.1

SORL1-208, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 616 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-208ENST00000529445 OTUD6BQ8N6M0 293 aa11.65□□□□□ -0.54
SORL1-208ENST00000529445 TRIM58Q8NG06 486 aa11.65□□□□□ -0.54
SORL1-208ENST00000529445 CFAP61Q8NHU2 1237 aa11.65□□□□□ -0.54
SORL1-208ENST00000529445 IP6K3Q96PC2 410 aa11.65□□□□□ -0.54
SORL1-208ENST00000529445 GBP5Q96PP8 586 aa11.65□□□□□ -0.54
SORL1-208ENST00000529445 NDC1Q9BTX1 674 aa11.65□□□□□ -0.54
SORL1-208ENST00000529445 HOMER3Q9NSC5 361 aa11.65□□□□□ -0.54
SORL1-208ENST00000529445 TREX1Q9NSU2 369 aa11.65□□□□□ -0.54
SORL1-208ENST00000529445 INTS7Q9NVH2 962 aaKnown RBP11.65□□□□□ -0.54
SORL1-208ENST00000529445 BFARQ9NZS9 450 aa11.65□□□□□ -0.54
SORL1-208ENST00000529445 NDOR1Q9UHB4 597 aa11.65□□□□□ -0.54
SORL1-208ENST00000529445 PLCL2Q9UPR0 1127 aa11.65□□□□□ -0.54
SORL1-208ENST00000529445 MRFAP1Q9Y605 127 aa11.65□□□□□ -0.54
SORL1-208ENST00000529445 SHANK1Q9Y566 2161 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 RASGRF2O14827 1237 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 HCRTR1O43613 425 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 NDUFS3O75489 264 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 CBSLP0DN79 551 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 TPSB2P20231 275 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 MAGP20916 626 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 CD9P21926 228 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 OTX2P32243 289 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 CBSP35520 551 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 FOLR3P41439 243 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 DCDP81605 110 aaKnown RBP11.64□□□□□ -0.55
SORL1-208ENST00000529445 CDK16Q00536 496 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 UBAP2LQ14157 1087 aaKnown RBP11.64□□□□□ -0.55
SORL1-208ENST00000529445 TPSAB1Q15661 275 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 RNF187Q5TA31 235 aaPredicted RBP11.64□□□□□ -0.55
SORL1-208ENST00000529445 MLIPQ5VWP3 458 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 MRNIPQ6NTE8 343 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 OTOAQ7RTW8 1153 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 MRGPREQ86SM8 312 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 DNAJC22Q8N4W6 341 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 RAB42Q8N4Z0 105 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 ZNF655Q8N720 491 aaPredicted RBP11.64□□□□□ -0.55
SORL1-208ENST00000529445 EFCAB3Q8N7B9 438 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 LINC01555Q8NAE3 123 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 OR2L8Q8NGY9 312 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 DLG3Q92796 817 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 MENTQ9BUN1 341 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 SPRTNQ9H040 489 aaPredicted RBP11.64□□□□□ -0.55
SORL1-208ENST00000529445 P2RY12Q9H244 342 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 MRM3Q9HC36 420 aaKnown RBP11.64□□□□□ -0.55
SORL1-208ENST00000529445 EURLQ9NYK6 297 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 GPR83Q9NYM4 423 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.64□□□□□ -0.55
SORL1-208ENST00000529445 IFT80Q9P2H3 777 aaPredicted RBP11.64□□□□□ -0.55
SORL1-208ENST00000529445 DHCR7Q9UBM7 475 aaKnown RBP11.64□□□□□ -0.55
SORL1-208ENST00000529445 SLC39A10Q9ULF5 831 aa11.64□□□□□ -0.55
SORL1-208ENST00000529445 PTRH2Q9Y3E5 179 aaKnown RBP11.64□□□□□ -0.55
SORL1-208ENST00000529445 PCSK5Q92824 1860 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 TTLL8A6PVC2 850 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 PEX12O00623 359 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 PFDN6O15212 129 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 ZNF185O15231 689 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 DPM1O60762 260 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 KLF7O75840 302 aaPredicted RBP11.63□□□□□ -0.55
SORL1-208ENST00000529445 FKBP9O95302 570 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 IGHEP01854 428 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 RPS3P23396 243 aaKnown RBP eCLIP11.63□□□□□ -0.55
SORL1-208ENST00000529445 MGAT1P26572 445 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 NMBRP28336 390 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 EIF3BP55884 814 aaKnown RBP11.63□□□□□ -0.55
SORL1-208ENST00000529445 GRB7Q14451 532 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 NADK2Q4G0N4 442 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 NKAIN1Q4KMZ8 207 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 ARMC3Q5W041 872 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 SDCCAG8Q86SQ7 713 aaPredicted RBP11.63□□□□□ -0.55
SORL1-208ENST00000529445 TAX1BP1Q86VP1 789 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 FAM20CQ8IXL6 584 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 FDCSPQ8NFU4 85 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 OR2Y1Q8NGV0 311 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 DENND1AQ8TEH3 1009 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 SKA2Q8WVK7 121 aaPredicted RBP11.63□□□□□ -0.55
SORL1-208ENST00000529445 RAD51AP1Q96B01 352 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 FER1L6-AS2Q96M78 137 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 IL17FQ96PD4 163 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 PHF12Q96QT6 1004 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 KIFC1Q9BW19 673 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 NUDT9Q9BW91 350 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 SYBUQ9NX95 663 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 CIDEBQ9UHD4 219 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 ESPL1Q14674 2120 aa11.63□□□□□ -0.55
SORL1-208ENST00000529445 HIVEP3Q5T1R4 2406 aa11.62□□□□□ -0.55
SORL1-208ENST00000529445 NBPF19A0A087WUL8 3843 aa11.62□□□□□ -0.55
SORL1-208ENST00000529445 CLEC18AA5D8T8 446 aa11.62□□□□□ -0.55
SORL1-208ENST00000529445 A6NL46 340 aa11.62□□□□□ -0.55
SORL1-208ENST00000529445 H3BMM5 538 aa11.62□□□□□ -0.55
SORL1-208ENST00000529445 NRDCO43847 1150 aa11.62□□□□□ -0.55
SORL1-208ENST00000529445 CEP104O60308 925 aa11.62□□□□□ -0.55
SORL1-208ENST00000529445 VPS4BO75351 444 aa11.62□□□□□ -0.55
SORL1-208ENST00000529445 SORBS2O94875 1100 aaKnown RBP11.62□□□□□ -0.55
SORL1-208ENST00000529445 VAPBO95292 243 aa11.62□□□□□ -0.55
SORL1-208ENST00000529445 CTSBP07858 339 aa11.62□□□□□ -0.55
SORL1-208ENST00000529445 CCNFP41002 786 aa11.62□□□□□ -0.55
SORL1-208ENST00000529445 ARSFP54793 590 aa11.62□□□□□ -0.55
SORL1-208ENST00000529445 SARNPP82979 210 aaKnown RBP11.62□□□□□ -0.55
SORL1-208ENST00000529445 SSPNQ14714 243 aa11.62□□□□□ -0.55
SORL1-208ENST00000529445 SLC9A5Q14940 896 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms