RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 PAGE3Q5JUK9 113 aa17.52■□□□□ 0.39
LTBP3-210ENST00000528516 ATAD3CQ5T2N8 411 aa17.52■□□□□ 0.39
LTBP3-210ENST00000528516 SPRYD7Q5W111 196 aa17.52■□□□□ 0.39
LTBP3-210ENST00000528516 DENND5AQ6IQ26 1287 aa17.52■□□□□ 0.39
LTBP3-210ENST00000528516 KHSRPQ92945 711 aaKnown RBP eCLIP17.52■□□□□ 0.39
LTBP3-210ENST00000528516 REXO5Q96IC2 774 aaKnown RBP17.52■□□□□ 0.39
LTBP3-210ENST00000528516 RBM4BQ9BQ04 359 aaKnown RBP17.52■□□□□ 0.39
LTBP3-210ENST00000528516 RBM4Q9BWF3 364 aaKnown RBP17.52■□□□□ 0.39
LTBP3-210ENST00000528516 RNF208Q9H0X6 261 aa17.52■□□□□ 0.39
LTBP3-210ENST00000528516 SAMHD1Q9Y3Z3 626 aaKnown RBP17.52■□□□□ 0.39
LTBP3-210ENST00000528516 IGKV6D-21A0A0A0MT36 114 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 PIRO00625 290 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 RFXANKO14593 260 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 OR1I1O60431 355 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 TSPAN9O75954 239 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 ANXA5P08758 320 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 MYCLP1P12525 358 aaPredicted RBP17.51■□□□□ 0.39
LTBP3-210ENST00000528516 RHOQP17081 205 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 MLLT6P55198 1093 aaPredicted RBP17.51■□□□□ 0.39
LTBP3-210ENST00000528516 AFTPHQ6ULP2 937 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 CDKN2AIPNLQ96HQ2 116 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 MTERF1Q99551 399 aaKnown RBP17.51■□□□□ 0.39
LTBP3-210ENST00000528516 MAGEL2Q9UJ55 1249 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 CPNE3O75131 537 aaKnown RBP17.51■□□□□ 0.39
LTBP3-210ENST00000528516 TSC22D2O75157 780 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 GABARAPO95166 117 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 LCP2Q13094 533 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 CLCA4Q14CN2 919 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 SIGIRRQ6IA17 410 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 FCRL5Q96RD9 977 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 SLC9A7Q96T83 725 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 TMLHEQ9NVH6 421 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 DNAJC15Q9Y5T4 150 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 ZBTB42B2RXF5 422 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 FXYD1O00168 92 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 RGS10O43665 173 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 MT-ND2P03891 347 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 GABRR2P28476 465 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 DNAJB13P59910 316 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 ACAP2Q15057 778 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 SDE2Q6IQ49 451 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 GOLM1Q8NBJ4 401 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 C2orf49Q9BVC5 232 aaPredicted RBP17.51■□□□□ 0.39
LTBP3-210ENST00000528516 MUC13Q9H3R2 512 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 ZBTB20Q9HC78 741 aaPredicted RBP17.51■□□□□ 0.39
LTBP3-210ENST00000528516 GMPPBQ9Y5P6 360 aa17.51■□□□□ 0.39
LTBP3-210ENST00000528516 IGKV6-21A0A0C4DH24 114 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 MYADML2A6NDP7 307 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 PTGESO14684 152 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 FFAR2O15552 330 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 MLYCDO95822 493 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 AZGP1P25311 298 aaKnown RBP17.5■□□□□ 0.39
LTBP3-210ENST00000528516 ZNF181Q2M3W8 571 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 TECRLQ5HYJ1 363 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 TYW3Q6IPR3 259 aaKnown RBP17.5■□□□□ 0.39
LTBP3-210ENST00000528516 METTL4Q8N3J2 472 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 OR10T2Q8NGX3 314 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 OGDHLQ9ULD0 1010 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 LOC110117498-PIK3R3F6TDL0 507 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 DPY19L1Q2PZI1 675 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 TYSND1Q2T9J0 566 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 TBRG1Q3YBR2 411 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 AGAP6Q5VW22 663 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 EEF1AKMT1Q8WVE0 214 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 SLC47A1Q96FL8 570 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 AGAP4Q96P64 663 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 PLSCR3Q9NRY6 295 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 INTS6Q9UL03 887 aaKnown RBP17.5■□□□□ 0.39
LTBP3-210ENST00000528516 A0A1W2PP18 115 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 MANSC4A6NHS7 340 aaPredicted RBP17.5■□□□□ 0.39
LTBP3-210ENST00000528516 TRIM64BA6NI03 449 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 GJB3O75712 270 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 EDNRBP24530 442 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 FOXA1P55317 472 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 XKR6Q5GH73 641 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 RBM23Q86U06 439 aaKnown RBP17.5■□□□□ 0.39
LTBP3-210ENST00000528516 TSEN34Q9BSV6 310 aaKnown RBP17.5■□□□□ 0.39
LTBP3-210ENST00000528516 TRMOQ9BU70 441 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 ZFYVE1Q9HBF4 777 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 FBXO8Q9NRD0 319 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 ABCD2Q9UBJ2 740 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 SLC25A13Q9UJS0 675 aa17.5■□□□□ 0.39
LTBP3-210ENST00000528516 COL1A2P08123 1366 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 FAM186AA6NE01 2351 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 GLTPD2A6NH11 291 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 TTC34A8MYJ7 566 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 UBFD1O14562 309 aaKnown RBP17.49■□□□□ 0.39
LTBP3-210ENST00000528516 PRKD3O94806 890 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 ALX3O95076 343 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 HTR1AP08908 422 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 RUNX1T1Q06455 604 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 SREBF2Q12772 1141 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 AGMOQ6ZNB7 445 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 LRRTM3Q86VH5 581 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 SETD9Q8NE22 299 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 ANKRD49Q8WVL7 239 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 SOCS4Q8WXH5 440 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 TARM1B6A8C7 271 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 PCDH8O95206 1070 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 IMPDH1P20839 514 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms